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Showing posts with the label wastewater

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (#CDC, June 13 '25)

  {Excerpt} Time Period: June 01, 2025 - June 07, 2025 - H5 Detection :  4 sites ( 1.1% ) - No Detection :  370 sites ( 98.9% ) - No samples in last week :  73 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, #Wastewater Data for Avian #Influenza A(#H5) (CDC, June 6 '25)

  {Excerpt} Time Period: May 25, 2025 - May 31, 2025 - H5 Detection :  10 sites ( 2.5% ) - No Detection :  389 sites ( 97.5% ) - No samples in last week :  52 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (US CDC, May 29 '25) {Updated}

  {Excerpt} Time Period: May 18, 2025 - May 24, 2025 -- H5 Detection :  17 sites ( 5.0% ) - No Detection :  322 sites ( 95.0% ) - No samples in last week :  116 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (CDC, May 23 '25)

{Excerpt} Time Period: May 11, 2025 - May 17, 2025 -- H5 Detection :  18 sites ( 4.5% ) -- No Detection :  381 sites ( 95.5% ) -- No samples in last week :  59 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (CDC, May 16 '25)

  {Excerpt} Time Period: April 27, 2025 - May 03, 2025 -- H5 Detection :  8 sites ( 2.0% ) - No Detection :  402 sites ( 98.0% ) - No samples in last week :  67 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (US #CDC, as of May 9 '25)

{Excerpt} Time Period: April 27, 2025 - May 03, 2025 - H5 Detection :  8 sites ( 2.0% ) - No Detection :  402 sites ( 98.0% ) - No samples in last week :  67 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

Wastewater surveillance for avian influenza: national patterns of detection and relationship with reported outbreaks and infections

Abstract Background .  Influenza A virus (IAV) is a major cause of morbidity and mortality globally , causing seasonal influenza in humans and infecting birds and some mammals. In 2024, IAV H5N1 highly pathogenic avian influenza (HPAI) in the United States moved into cattle. While the outbreak is currently of low risk to the general public, there is an urgent need to monitor the disease and prevent spread.  Methods .  We conducted a nationwide study evaluating the relationship between H5 hemagglutinin gene RNA concentrations in wastewater and reported outbreaks of IAV H5N1 in animals and humans . We utilized an H5-specific droplet digital RT-PCR test to quantify H5 RNA in wastewater in 40 states across the United States, and 1) examined the temporal association between outbreaks and wastewater detections and 2) utilized linear mixed models (LMM) to determine the relationship between measurements in wastewater and outbreak-related factors in the local area.  Results ....

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (as of May 2 '25)

{Excerpt} Time Period: April 20, 2025 - April 26, 2025 - H5 Detection :  5 sites ( 1.2% ) - No Detection :  402 sites ( 98.8% ) - No samples in last week :  91 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {as of April 25 '25}

{Excerpt} Time Period: April 13, 2025 - April 19, 2025 -- H5 Detection :  4 sites ( 1.0% ) -- No Detection :  406 sites ( 99.0% ) -- No samples in last week :  153 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html?cove-tab=0 ____

#Wastewater #sequencing reveals the #genomic landscape of #Influenza A virus in #Switzerland

Abstract Influenza A virus poses significant public health challenges , causing seasonal outbreaks and pandemics. Its rapid evolution motivates continuous monitoring of circulating influenza genomes to inform vaccine and antiviral development. Wastewater-based surveillance offers an unbiased, cost-effective approach for genomic surveillance. We developed a novel tiling amplicon primer panel that covers diversity of influenza A virus, targeting segments of the surface proteins HA, NA, and M of subtypes H1N1 and H3N2. Using this panel, we sequenced nucleic acid extracts from 59 Swiss wastewater samples collected at four locations during the 2022/2023 and 2023/2024 winter seasons. We found that wastewater-based abundance estimates of the dominant H1N1 clades correlated with clinical-based estimates in the 2023/2024 season. Furthermore, wastewater-based sequencing revealed mutations in vaccine and drug target sites , consistent with clinical data. Overall, we demonstrate the effectiveness ...

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (as of April 18 '25)

{Excerpt} Time Period: April 06, 2025 - April 12, 2025 -- H5 Detection :  3 sites ( 0.9% ) -- No Detection :  348 sites ( 99.1% ) -- No samples in last week :  243 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html?cove-tab=0 ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater (as of April 11 '25)

{Excerpt} Time Period: March 30, 2025 - April 05, 2025 -- H5 Detection :  4 sites ( 1.1% ) -- No Detection :  372 sites ( 98.9% ) -- No samples in last week :  256 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

Detection of #Measles in #Texas #Wastewater

Abstract Measles outbreaks continue to pose significant public health challenges globally despite the availability of effective vaccines. In this study, we evaluated wastewater-based surveillance for detection of measles virus during an ongoing outbreak in Texas . Weekly wastewater samples collected from two Texas cities between January 2 and March 17, 2025 were analyzed using multiple RT-PCR assays targeting the nucleoprotein and matrix genes of the measles virus. Viral RNA was detected in multiple days from both cities , with City A showing positives from January 13 and City B from January 6, both predating the first confirmed case in the state on January 23. Sequencing of PCR amplicons confirmed the specificity of detection and phylogenetic analysis using global and U.S. measles genome databases further validated that the viral RNA belonged to the currently circulating genotype D8 . Our findings demonstrate that wastewater surveillance can provide early evidence of measles virus cir...

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {as of April 4 '25}

  {Excerpt} Time Period: March 23, 2025 - March 29, 2025 -- H5 Detection :  9 sites ( 2.2% ) -- No Detection :  400 sites ( 97.8% ) -- No samples in last week :  228 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {US CDC, March 28 '25}

{Excerpt} Time Period: March 16 - March 22, 2025 -- H5 Detection :  5 sites ( 1.2% ) -- No Detection :  401 sites ( 98.8% ) -- No samples in last week :  211 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza #H5 Virus In #Wastewater {week 11-25}

{Excerpt} Time Period: March 09 - March 15, 2025 -- H5 Detection :  12 sites ( 2.7% ) -- No Detection :  431 sites ( 97.3% ) -- No samples in last week :  177 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {as of March 14 '25}

  Time Period: March 02 - March 08, 2025 - H5 Detection :  29 sites ( 6.2% ) - No Detection :  438 sites ( 93.8% ) - No samples in last week :  152 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

Highly Pathogenic Avian #Influenza A(#H5N1) Virus #Stability in Irradiated Raw #Milk and #Wastewater and on #Surfaces, #USA

Abstract We measured stability of infectious influenza A(H5N1) virus in irradiated raw milk and wastewater and on surfaces . We found a relatively slow decay in milk , indicating that contaminated milk and fomites pose transmission risks . Although the risk is low, our results call for caution in milk handling and disposal from infected cattle. Source: US Centers for Disease Control and Prevention,  https://wwwnc.cdc.gov/eid/article/31/4/24-1615_article ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {March 7 '25}

{Excerpt} Time Period: February 23 - March 01, 2025 - H5 Detection :  8 sites ( 1.8% ) - No Detection :  445 sites ( 98.2% ) - No samples in last week :  100 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {Feb. 28 '25}

  {Excerpt} Time Period: February 16 - February 22, 2025 -- H5 Detection :  10 sites ( 2.6% ) -- No Detection :  379 sites ( 97.4% ) -- No samples in last week :  75 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____