ETIDIOH - NEW

  {Summary} Time Period: August 17, 2025 - August 23, 2025 -- H5 Detection :  2 sites ( 0.5% ) -- No Detection :  429 sites ( 99.5% ) -- No samples in last week :  31 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Summary} Time Period: August 10, 2025 - August 16, 2025 -- H5 Detection :  1 site ( 0.2% ) -- No Detection :  422 sites ( 99.8% ) -- No samples in last week :  37 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Summary} Time Period: August 03, 2025 - August 09, 2025 -- H5 Detection :  2 sites ( 0.5% ) -- No Detection :  425 sites ( 99.5% ) -- No samples in last week :  33 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  Abstract The COVID-19 pandemic has accelerated the development and adoption of wastewater-based epidemiology . Wastewater samples can provide genomic information for detecting and assessing the spread of SARS-CoV-2 variants in communities and for estimating important epidemiological parameters such as the selection advantage of a viral variant . However, despite demonstrated successes, epidemiological data derived from wastewater suffers from potential biases . Of particular concern are shedding profiles , which can affect the relationship between true viral incidence and viral loads in wastewater. Changes in shedding between variants may decouple the established relationship between wastewater loads and clinical test data. Using mathematical modeling, simulations, and Swiss surveillance data , we demonstrate that estimates of the selection advantage of a variant are not biased by shedding profiles. We show that they are robust to differences in shedding between variants under a ...

  {Summary} Time Period: July 27, 2025 - August 02, 2025 -- H5 Detection :  4 sites ( 0.9% ) -- No Detection :  430 sites (99.1%) -- No samples in last week :  24 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Excerpt} Time Period: July 20, 2025 - July 26, 2025 -- H5 Detection :  4 sites ( 1.0% ) -- No Detection :  391 sites ( 99.0% ) -- No samples in last week :  38 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

Abstract Seasonal respiratory viruses, such as the Influenza A virus and the respiratory syncytial virus, are responsible for over a billion infections worldwide each year resulting in a substantial burden on health care systems . Surveillance of these viruses, including their prevalence in communities and their evolution , are essential for informing public health decisions and recommending vaccine formulations and schedules. Typically, these viruses are monitored using clinical samples from patients seeking medical attention. Recently, wastewater-based surveillance (WBS) has been leveraged to understand transmission dynamics and genome evolution of SARS-CoV-2 and seasonal respiratory viruses. To further the utility of WBS we developed and implemented novel tiled-amplicon sequencing assays to identify and track Influenza A virus H3N2 and respiratory syncytial virus A circulating in Southern Ontario, Canada . We also developed virus specific deconvolution tools to estimate the abundanc...

Abstract In 2024, highly pathogenic avian influenza A H5N1 caused outbreaks in wild birds, poultry, cows, and other mammals in the United States with 61 human cases also reported by the CDC. Detection of influenza A H5 RNA in wastewater has been previously reported in sewersheds in Texas and North Carolina with nearby impacted dairy herds following the emergence of H5N1 in dairy cows. Here, we conduct retrospective testing of total influenza A and H5 hemagglutinin genes in wastewater as well as present and apply new assays for detection of H1 and H3 genes across a respiratory virus season in an urban California sewershed from September 2023 to May 2024. Total influenza A, H1, and H3 were regularly detected, while H5 was first detected in March . We developed a model that uses Monte Carlo simulations and previously published parameters to estimate the numbers of infected people, poultry, wild birds, or liters of H5-contaminated milk required to result in measured H5 concentrations in wa...

  {Excerpt} Time Period: July 13, 2025 - July 19, 2025 -- H5 Detection :  2 sites ( 0.5% ) -- No Detection :  380 sites ( 99.5% ) -- No samples in last week :  47 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Excerpt} Time Period: July 06, 2025 - July 12, 2025 -- H5 Detection :  2 sites ( 0.5% ) -- No Detection :  395 sites ( 99.5% ) -- No samples in last week :  51 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html _____

  {Excerpt} Time Period: June 29, 2025 - July 05, 2025 -- H5 Detection :  2 sites ( 0.6% ) -- No Detection :  330 sites ( 99.4% ) -- No samples in last week :  77 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

Abstract We report widespread detection of parvovirus B19 in Texas Wastewater using hybrid-capture virome sequencing across 43 sites. Wastewater signal correlated with clinical cases at institutional, county, and state levels and preceded case surges by one month . Full-genome coverage enabled real-time mutation tracking, highlighting wastewater's utility for epidemiologic surveillance. Source: MedRxIV,  https://www.medrxiv.org/content/10.1101/2025.07.07.25331044v1 ____

  {Excerpt} Time Period: June 22, 2025 - June 28, 2025 -- H5 Detection :  3 sites ( 0.8% ) -- No Detection :  370 sites ( 99.2% ) -- No samples in last week :  52 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Excerpts} Time Period: June 15, 2025 - June 21, 2025 - H5 Detection :  3 sites ( 0.8% ) - No Detection :  367 sites ( 99.2% ) - No samples in last week :  55 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

  {Excerpt} Time Period: June 01, 2025 - June 07, 2025 - H5 Detection :  4 sites ( 1.1% ) - No Detection :  370 sites ( 98.9% ) - No samples in last week :  73 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

  {Excerpt} Time Period: June 01, 2025 - June 07, 2025 - H5 Detection :  4 sites ( 1.1% ) - No Detection :  370 sites ( 98.9% ) - No samples in last week :  73 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

  {Excerpt} Time Period: May 25, 2025 - May 31, 2025 - H5 Detection :  10 sites ( 2.5% ) - No Detection :  389 sites ( 97.5% ) - No samples in last week :  52 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

  {Excerpt} Time Period: May 18, 2025 - May 24, 2025 -- H5 Detection :  17 sites ( 5.0% ) - No Detection :  322 sites ( 95.0% ) - No samples in last week :  116 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

{Excerpt} Time Period: May 11, 2025 - May 17, 2025 -- H5 Detection :  18 sites ( 4.5% ) -- No Detection :  381 sites ( 95.5% ) -- No samples in last week :  59 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

  {Excerpt} Time Period: April 27, 2025 - May 03, 2025 -- H5 Detection :  8 sites ( 2.0% ) - No Detection :  402 sites ( 98.0% ) - No samples in last week :  67 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____