Saturday, January 18, 2025

#USA, #Connecticut: Highly Pathogenic Avian #Influenza #H5N1 Detected in New London County #Backyard #Poultry Flock

(HARTFORD, CT) – Connecticut Department of Agriculture (CT DoAg) advises that Highly Pathogenic Avian Influenza (HPAI) H5N1, or bird flu, was confirmed in a backyard flock located in New London County on Wednesday, January 15, 2025

The backyard flock, consisting of chickens, ducks, and peacocks, were family pets, not commercial poultry, and had close contact with wild waterfowl in a nearby pond.

Samples were sent to the Connecticut Veterinary Medical Diagnostic Laboratory (CVMDL) for testing. The results from CVMDL were then confirmed by the United States Department of Agriculture National Veterinary Services Laboratory (NVSL) in Ames, Iowa. H5N1 is highly contagious among domestic poultry, and at this time there is no effective treatment or approved vaccine for the virus in poultry. The infected flock has been depopulated to prevent spread of the disease.

“Collaboration between state and federal partners is essential in preventing the spread of highly pathogenic avian influenza in poultry and safeguarding the health of our farmworkers,” said Agriculture Commissioner Bryan P. Hurlburt. “Through a united approach we are able to swiftly identify and respond to protect our food supply and ensure the health of our communities.”

All poultry owners and producers are advised to enhance biosecurity protocols to protect their backyard and commercial poultry flocks against H5N1.

“Biosecurity is the best defense for a flock owner to protect their birds from disease,” said State Veterinarian Dr. Thamus Morgan, DVM, MPH, DACVPM. “This should be top of mind for commercial and backyard hobby owners – we must all work together – to reduce the risk.”

Biosecurity Tips

-- Poultry biosecurity materials and checklists can be found on the USDA’s Defend the Flock website. Best practices include:

- Keep wild birds and rodents out of poultry houses and coops.

- Don’t let poultry have contact with migratory waterfowl or other wild birds.

- Wash hands and boots before and after entering the poultry area.

- Buy birds from reputable sources to receive heathy birds.

- Restrict traffic onto and off your property.

- Have a written biosecurity plan in place.

Signs of H5N1 infection include sudden increase in bird deaths, sneezing, coughing, nasal discharge, watery or green diarrhea, lack of energy, poor appetite, drop in egg production, swelling around the eyes, neck, and head, and purple discoloration of wattles, combs, and legs.

Flock owners are encouraged to report anything unusual, especially sick or dead birds, to CT DoAg at 860-713-2505 or ctstate.vet@ct.gov or the USDA at 866-536-7593.

(...)

Source: Department of Agriculture, https://portal.ct.gov/doag/press-room/press-releases/2025/january/highly-pathogenic-avian-influenza-h5n1-detected-in-new-london-county-backyard-flock

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#USA, Highly Pathogenic Avian #Influenza #H5N1 Confirmed in Commercial #Poultry Flock in #Georgia, All Poultry Activities Suspended

Atlanta, Ga – Today, the Georgia Department of Agriculture and the United States Department of Agriculture’s Animal and Plant Health Inspection Service confirmed a positive case of Highly Pathogenic Avian Influenza (HPAI) in a commercial poultry operation located in Elbert County, Georgia

This is the first confirmed HPAI case in a commercial poultry operation in Georgia, and the fifth detection in the state of Georgia

As a result of this detection, effective immediately, all in-state poultry exhibitions, shows, swaps, meets, and sales are suspended until further notice.  

"For the first time since the ongoing, nationwide outbreak began in 2022, HPAI has been confirmed in a commercial poultry operation in the state of Georgia," said Georgia Agriculture Commissioner Tyler Harper. 

"This is a serious threat to Georgia’s #1 industry and the livelihoods of thousands of Georgians who make their living in our state’s poultry industry. We are working around the clock to mitigate any further spread of the disease and ensure that normal poultry activities in Georgia can resume as quickly as possible."

On Wednesday, January 15th, 2025, the producer noticed clinical signs of Avian Influenza in their flock. Samples were collected on the morning of Thursday, January 16th, 2025, and transported to the Georgia Poultry Laboratory Network (GPLN) for testing. A positive HPAI detection was confirmed by GPLN on Thursday afternoon, and further confirmed by USDA’s National Veterinary Services Laboratory on Friday, January 17th, 2025. 

The Georgia Department of Agriculture’s Emergency Management and State Agricultural Response Teams (SART) immediately deployed to the affected premises to conduct depopulation, cleaning and disinfecting, and disposal operations on Friday, January 17th, 2025.  Operations are expected to continue into the weekend. The affected premises had approximately 45,000 broiler breeders onsite at the time of detection. 

All commercial poultry operations within a 10 Kilometer (6.2 mile) radius have been placed under quarantine and will undergo surveillance testing for a period of at least two weeks. 

As a result of this detection, poultry exhibitions, shows, swaps, and sales (flea market or auction market) in the State of Georgia are suspended until further notice. Notifications will be issued when the listed activities may resume in Georgia. 

###

Date: January 17, 2025 

To: Georgia Poultry Producers 

Subject: HPAI in the United States 

From: Janemarie Hennebelle, DVM, MPVM State Veterinarian 

Effective immediately all poultry exhibitions, shows, swaps, meets, and sales (Flea Markets, Auction Markets) in the State of Georgia are suspended until further notice.

Highly Pathogenic Avian Influenza (HPAI) has been identified in commercial poultry flocks and a backyard flock in the State of Georgia alongside an increasing number of cases nationwide. Please see Commercial, Backyard, & Wildlife cases in the United States (USDA APHIS) for more information about HPAI detections in the United States. 

Poultry exhibitions, shows, swaps, meets, and sales (flea markets, auction markets) in the State of Georgia are suspended until further notice. Notifications will be announced when listed activities can resume in Georgia. 

Good biosecurity practices are the best defense against AI infection and poultry producers must take the following measures to protect their flocks: 

-- Move poultry with outside access indoors. 

-- Continue strict biosecurity practices, including a clear line of separation on the farm. 

-- Monitor flocks for clinical signs of HPAI. 

-- Birds may become quiet, not eat or drink, and have discolored combs and feet, or die suddenly with no signs of disease. 

-- Report unexplained mortality in your birds immediately. 

-- Avian Influenza (AI) is a reportable disease in Georgia. If you have concerns about AI in birds, call the Georgia Avian Influenza hotline at 770-766-6850 or visit https://www.gapoultrylab.org/avian-influenza-hotline/. 

-- Report dead wild birds when seen in unusually high numbers in a single location to DNR. Call 1-800-366-2661 or report online at https://georgiawildlife.com/report-dead-birds. 

Biosecurity and other resources

- GDA Avian Influenza Resource Page 

- Protect Your Flock (GDA) 

- Defend the Flock - Resource Center (USDA APHIS)

Source: Department of Agriculture, https://agr.georgia.gov/pr/highly-pathogenic-avian-influenza-confirmed-commercial-poultry-flock-georgia-all-poultry

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Friday, January 17, 2025

#USA, #USDA: APHIS Updates #Policy to Enhance #Surveillance of #Turkey #Flocks in Highly Pathogenic Avian #Influenza Affected States

WASHINGTON, January 17, 2025—As part of its ongoing, multi-faceted efforts to combat the spread of highly pathogenic avian influenza (HPAI), USDA’s Animal and Plant Health Inspection Service (APHIS) today is updating its policy for pre-slaughter surveillance to enhance testing of turkey flocks in affected states

In late December 2024, APHIS became aware of a genetic link between turkeys potentially infected with HPAI H5N1, virus detected in raw pet food, and an infected household cat.

Out of an abundance of caution, and to remove a potential avenue for ongoing disease spread as well as to bolster consumer and trading partner confidence, APHIS collaborated with state animal health officials and the poultry industry to update its guidance for existing pre-slaughter surveillance steps to further ensure that affected poultry does not enter the food system. APHIS will continue to report confirmed HPAI detections to the World Organisation for Animal Health and on the APHIS website (more information below).

These updates include implementing isolation with clinical monitoring and premovement testing 72 hours prior to sending to slaughter, for turkey premises outside control areas in HPAI-affected states. 

Specifically, APHIS will be piloting this enhanced pre-slaughter surveillance, starting with turkey premises greater than 500 birds in Minnesota and South Dakota, based on current and historical HPAI detections of commercial turkey premises in these states. These states were selected because of genetic linkages to virus from infected cats and because of the high percentage of cases in turkeys in those states. APHIS will continue to evaluate progress of the outbreak and may update this policy, if needed, to include additional states.

USDA consistently operates on a science-based, step-by-step approach, informed by what it learns about this virus through its everyday work and research and surveillance efforts. APHIS will continue to update its guidance for pre-slaughter surveillance schemes as USDA continues to follow the science on HPAI.

In May 2024, USDA announced the transfer of $824 million from the Commodity Credit Corporation (CCC) to APHIS to directly support H5N1 response efforts. This funding supports anticipated diagnostics; field response activities; pre-movement testing requirements; other necessary surveillance and control activities, including surveillance in wildlife; the Agricultural Research Service’s (ARS) work in developing vaccines for HPAI in cattle, turkeys, pigs, and goats; and food safety studies carried out by ARS and the Food Safety and Inspection Service (FSIS).

USDA remains confident in the safety of the food supply. FSIS, APHIS, and ARS have completed multiple studies to confirm that poultry and eggs that are properly prepared and cooked are safe to eat. Additionally, to verify the safety of the meat supply, these agencies have completed three separate beef safety studies related to avian influenza in meat from dairy cattle.

APHIS continues to work closely with state animal health officials on surveillance efforts to look for the virus in commercial, backyard, and wild birds. We also continue to encourage all bird owners to practice strong biosecurity—that means reducing opportunities for wildlife to spread the virus to their birds and preventing the spread of the virus from one premises to another. APHIS will continue to publicly post poultry detections on its dashboard. USDA also makes genetic sequences from the U.S. H5N1 clade 2.3.4.4b influenza virus available on GISAID (the Global Initiative on Sharing Avian Influenza Data) and the National Center for Biotechnology Information (NCBI) Sequence Read Archive (use search term “WGS of H5N1”).

(...)

Source: US Department of Agriculture, https://www.aphis.usda.gov/news/agency-announcements/aphis-updates-policy-enhance-surveillance-turkey-flocks-highly-pathogenic

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#USA, #FDA: #Cat and #Dog #Food #Manufacturers Required to Consider #H5N1 in Food #Safety Plans

January 17, 2025

The U.S. Food and Drug Administration has determined that it is necessary for manufacturers of cat and dog foods who are covered by the FDA Food Safety Modernization Act Preventive Controls for Animal Food (PCAF) rule and using uncooked or unpasteurized materials derived from poultry or cattle (e.g., uncooked meat, unpasteurized milk or unpasteurized eggs) to reanalyze their food safety plans to include Highly Pathogenic Avian Influenza virus (specifically H5N1) as a known or reasonably foreseeable hazard

Furthermore, the FDA is issuing this update to ensure that cat and dog food manufacturers are aware of information about the new H5N1 hazard associated with their pet food products, which is an additional reason that manufacturers must conduct a reanalysis of their food safety plans.

The FDA is tracking cases of H5N1 in domestic and wild cats in California, Colorado, Oregon and Washington State that are associated with eating contaminated food products. 

Scientific information is evolving, but at this time it is known that H5N1 can be transmitted to cats and dogs when they eat products from infected poultry or cattle (e.g., unpasteurized milk, uncooked meat, or unpasteurized eggs) that have not undergone a processing step that is capable of inactivating the virus, such as pasteurizing, cooking or canning. 

Cats (domestic and large felids) in particular can experience severe illness or death from infection with H5N1. Dogs can also contract H5N1, although they usually exhibit mild clinical signs and low mortality compared to cats. At present, H5N1 has not been detected in dogs in the United States, but there have been fatal cases in other countries. 

The FDA Food Safety Modernization Act Preventive Controls for Animal Food (PCAF) rule requires that certain animal food businesses develop a food safety plan. In this food safety plan, animal food businesses must identify and evaluate known or reasonably foreseeable hazards for each type of animal food manufactured, processed, packed, or held at their facility to determine whether there are any hazards requiring a preventive control. 

Businesses must identify these hazards based on experience, illness data, scientific reports, and other information. In the hazard evaluation, animal food businesses must assess the severity of the illness or injury to humans or animals if the hazard were to occur and the probability that the hazard will occur in the absence of preventive controls. The animal food industry can find guidance related to these requirements in the FDA’s Center for Veterinary Medicine’s Guidance for Industry #245, “Hazard Analysis and Risk-Based Preventive Controls for Food for Animals.”

Under the PCAF requirements, animal food businesses must conduct a reanalysis of their food safety plan when the FDA determines it is necessary to respond to new hazards and developments in scientific understanding. The FDA has determined that it is necessary for cat and dog food manufacturers covered by the PCAF rule, who are using uncooked or unpasteurized materials derived from poultry or cattle (e.g., uncooked meat, unpasteurized milk, unpasteurized eggs) in cat or dog food, to reanalyze their food safety plans to include H5N1 as a new known or reasonably foreseeable hazard. 

The reanalysis is necessary to respond to the recent domestic cat illnesses and deaths described above and to scientific data indicating that cats and dogs have become ill from consuming H5N1 virus. 

Manufacturers that implement a preventive control for the H5N1 hazard as a result of their reanalysis will be taking an important step toward protecting cat and dog health and helping to prevent spread of H5N1. Addressing H5N1 will require a concerted effort across sectors, including by government, businesses, and consumers.

Manufacturers also are required to conduct a reanalysis of their food safety plans when they become aware of new information about potential hazards associated with animal food. The FDA and the American Veterinary Medical AssociationExternal Link Disclaimer have previously published information on risks to pets from H5N1, which has been amplified in mainstream media. Some additional published references are listed below. 

As we learn more about the transmission of H5N1 in animal food, there are several practices that the FDA is encouraging pet food manufacturers and others in the supply chain to use to significantly minimize or prevent H5N1 transmission through animal food. 

These practices include seeking ingredients from flocks or herds that are healthy, and taking processing steps, such as heat treatment, that are capable of inactivating viruses. 

For example, some businesses already implement a heat treatment step that is capable of inactivating the virus as a process control. Heat treatments have been shown to be effective for inactivating H5N1 in meat, milk, and egg products. A different practice would be to implement a supply-chain-applied control to provide assurance that ingredients used in animal food do not come from H5N1-infected animals. 

To assist animal food businesses as they conduct their reanalysis, we have included a summary of current scientific literature regarding (1) the prevalence of H5N1 in cattle and poultry and their animal-derived ingredients, (2) the severity of H5N1 illness or injury in cats and dogs, and (3) the impact of processing steps on inactivating H5N1. 

The FDA and the United States Department of Agriculture (USDA) remain confident in the safety of the food supply. USDA’s Food Safety and Inspection Service, Animal and Plant Health Inspection Service, and  Agricultural Research Service (ARS) have completed multiple studies to confirm that meat, poultry and eggs that are properly prepared and cooked are safe to eat. Additionally, to verify the safety of the meat these agencies have completed three separate beef safety studies related to avian influenza in meat from dairy cattle. Furthermore, USDA and the U.S. Food and Drug Administration (FDA) have performed multiple retail sampling studies to reaffirm the safety of the pasteurized milk supply and milk products.

Source: US Food and Drugs Administration, https://www.fda.gov/animal-veterinary/cvm-updates/cat-and-dog-food-manufacturers-required-consider-h5n1-food-safety-plans

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#Italy, Avian #influenza {#H5N1}: a #cat tested positive after being in close contact with backyard #poultry

{Original Article in Italian, edited and translated}

 17/01/2025 13:28

Bologna – In Valsamoggia (Bo) a case of avian influenza was found in a cat. The animal lived in close contact with the poultry of a small family farm where the avian infection had already been identified which had led, as required by law, to the suppression of all the poultry present.

The positivity in the cat was diagnosed by the Forlì branch of the Experimental Zooprophylactic Institute of Lombardy and Emilia-Romagna and confirmed by the National Reference Center for Avian Influenza.

“Nothing new and no alarm,” commented Pierluigi Viale , professor of Infectious Diseases at the Department of Medical and Surgical Sciences at the University of Bologna and director of the Infectious Diseases Unit at the Sant’Orsola Polyclinic. 

“The circulation of avian influenza is well known. Cats are already described in scientific literature as animals quite prone to contracting the ‘bird flu’ and there have been several recorded cases of cats dying from avian influenza in the USA, Canada and Europe. But these are mostly stray cats, street cats, that live in rural areas and that can come into contact with infected organic material. A situation that therefore does not concern our domestic cats that live in the city or in apartments.”

Dr. Giovanni Tosi , director of the Zooprofilattico branch in Forlì, confirms that there are avian influenza viruses that can also adapt to mammals (including humans), but the risk of contracting the infection is very low and is linked to close and prolonged contact with infected birds. A situation that therefore does not concern domestic animals that live in the city or in apartments.

Even with regard to food safety, there is no risk associated with the consumption of poultry meat and there is no risk of infection for humans, except in conditions of close contact with infected animals.

Given the exceptional nature of the cases, Community legislation does not provide for specific control measures for cats positive for avian influenza, but for the protection of the animals themselves it is recommended that they be kept isolated under the control of the veterinary service of the ASL which carries out surveillance to evaluate the clinical progress of the disease and follow the course of the infection.

To contain the virus and prevent its spread, the veterinary service of the Bologna Local Health Authority is currently carrying out preliminary tests on blood samples and swabs on another cat that lived with the one that tested positive.

(...)

Source: Emilia-Romagna Region Government, https://notizie.regione.emilia-romagna.it/comunicati/2025/gennaio/sanita-influenza-aviaria-risultato-positivo-un-gatto-a-valsamoggia-bo-viveva-a-stretto-contatto-con-il-pollame-di-un-allevamento-familiare-risultato-infetto-attivato-subito-il-servizio-veterinario-dell2019azienda-usl-per-circoscrivere-e-impedire-la

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#Germany - #Influenza A #H5N5 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

 Wild Laridae birds in Schleswig-Holstein Region.

Source: WOAH, https://wahis.woah.org/#/in-review/6196

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Low-Level #Zoonotic #Transmission of Clade C #MERS-CoV in #Africa: Insights from Scoping Review and Cohort Studies in #Hospital and Community Settings

Abstract

Human outbreaks of Middle East respiratory syndrome coronavirus (MERS-CoV) are more common in Middle Eastern and Asian human populations, associated with clades A and B. In Africa, where clade C is dominant in camels, human cases are minimal. We reviewed 16 studies (n = 6198) published across seven African countries between 2012 and 2024 to assess human MERS-CoV cases. We also analyzed data from four cohort studies conducted in camel-keeping communities between 2018 and 2024 involving camel keepers, camel slaughterhouse workers, and hospital patients with acute respiratory illness (ARI). The analysis showed a pooled MERS-CoV prevalence of 2.4% (IQR: 0.6, 11.4) from 16 publications and 1.14% from 4 cohort studies (n = 2353). Symptomatic cases were rarely reported, with most individuals reporting camel contact, and only 12% had travel history to the Middle East. There was one travel-associated reported death, resulting in a mortality rate of 0.013%. The findings suggest a low camel-to-human transmission of clade C MERS-CoV in Africa. Ongoing research focuses on genomic comparisons between clade C and the more virulent clades A and B, alongside the surveillance of viral evolution. This study highlights the need for continuous monitoring but indicates that MERS-CoV clade C currently poses a minimal public health threat in Africa.

Source: Viruses, https://www.mdpi.com/1999-4915/17/1/125

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#USA, #Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {Jan. 5-11 '25}

 {Excerpt}

Time Period: January 05 - January 11, 2025

-- H5 Detection: 53 sites (15.8%)

-- No Detection: 282 sites (84.2%)

-- No samples in last week: 61 sites



(...)

Source: US Centers for Disease Control and Prevention, https://www.cdc.gov/bird-flu/h5-monitoring/index.html

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#USA, Novel #Influenza A #H5N1 Virus: One Pediatric Case in #California {FluView}

 {Excerpt}

One confirmed human infection with influenza A(H5) virus was reported to CDC this week. To date, human-to-human transmission of influenza A(H5) virus has not been identified in the United States.

This case was reported by the California Department of Public Health and occurred in a child less than 18 years old with no known contact with influenza A(H5N1) virus-infected animals or humans. The investigation into the source of infection for this case is ongoing, and no human-to-human transmission has been identified.

A specimen from the individual was tested at a public health laboratory using the CDC influenza A(H5) assay before being sent to CDC for further testing. The specimen was positive for influenza A(H5) virus using diagnostic RT-PCR at CDC. Additional analysis including genetic sequencing is underway. In response to this detection, additional case investigation and contact monitoring are being conducted by public health officials in California.

There have now been 38 total confirmed human A(H5) cases and one probable human case of A(H5) case in California. This is the second reported pediatric case in California and in the United States.

Notification to WHO of this case was initiated per International Health Regulations (IHR). More information regarding IHR can be found at http://www.who.int/topics/international_health_regulations/en/.

The CSTE position statement, which includes updated case definitions for confirmed, probable, and suspected cases is available at http://www.cste.org/resource/resmgr/position_statements_files_2023/24-ID-09_Novel_Influenza_A.pdf

An up-to-date human case summary during the outbreak by state and exposure source is available at www.cdc.gov/bird-flu/situation-summary/index.html

Information about avian influenza is available at https://www.cdc.gov/flu/avianflu/index.htm.

Interim recommendations for Prevention, Monitoring, and Public Health Investigations are available at https://www.cdc.gov/bird-flu/prevention/hpai-interim-recommendations.html.

The latest case reports on avian influenza outbreaks in wild birds, commercial poultry, backyard or hobbyist flocks, and mammals in the United States are available from the USDA at https://www.aphis.usda.gov/aphis/ourfocus/animalhealth/animal-disease-information/avian/avian-influenza/2022-hpai.

(...)

Source: US Centers for Disease Control and Prevention, https://www.cdc.gov/fluview/surveillance/2025-week-02.html

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Isoleucine at position 137 of #Hemagglutinin acts as a #Mammalian #adaptation #marker of #H9N2 Avian #influenza virus

Abstract

The H9N2 subtype of avian influenza virus (AIV) is widely distributed among poultry and wild birds and is also a threat to humans. During AIV active surveillance in Liaoning province from 2015 to 2016, we identified ten H9N2 strains exhibiting different lethality to chick embryos. Two representative strains, A/chicken/China/LN07/2016 (CKLN/07) and A/chicken/China/LN17/2016 (CKLN/17), with similar genomic background but different chick embryo lethality, were chosen to evaluate the molecular basis for this difference. A series of reassortants between CKLN/07 and CKLN/17 were generated and their chick embryo lethality was assessed. We found that the isoleucine (I) residue at position 137 (H3 numbering) in the hemagglutinin (HA) was responsible for the chick embryo lethality of the H9N2 virus. Further studies revealed that the threonine (T) to I mutation at HA position 137 enhanced viral replication in vitro and in vivo. Moreover, the HA-T137I substitution in H9N2 avian influenza virus increased the guinea pig transmission efficiency. We also found that the HA-T137I substitution was critical for α2,6-linked sialic acid binding preference and HA activation and stability of H9N2 virus. Our findings demonstrated that HA-137I is a key molecular marker for mammalian adaptation of H9N2 AIV.

Source: Emerging Microbes and Infections, https://www.tandfonline.com/doi/full/10.1080/22221751.2025.2455597

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#Antibody responses against #influenza A decline with successive years of annual influenza #vaccination

Abstract

Influenza vaccine effectiveness and immunogenicity can be compromised with repeated vaccination. We assessed immunological markers in a cohort of healthcare workers (HCW) from six public hospitals around Australia during 2020–2021. Sera were collected pre-vaccination and ~14 and ~180 days post-vaccination and assessed in haemagglutination inhibition assay against egg-grown vaccine and equivalent cell-grown viruses. Responses to vaccination were compared by the number of prior vaccinations. Baseline sera were available for 595 HCW in 2020 and 1031 in 2021. 5% had not been vaccinated during five years prior to enrolment and 55% had been vaccinated every year. Post-vaccination titres for all vaccine antigens were lowest among HCW vaccinated in all 5-prior years and highest among HCW with 0 or 1 prior vaccinations, even after adjustment. This was observed for both influenza A subtypes and was dependent on pre-vaccination titre. Expanded cohorts are needed to better understand how this translates to vaccine effectiveness.

Source: npj Vaccines, https://www.nature.com/articles/s41541-024-01057-x

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#Mongolia - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification [FINAL]

Active surveillance for avian influenza was conducted in October 2024 at Ganga Lake, located in the eastern region of Mongolia along the East Asian-Australasian Flyway for migratory birds. During the surveillance period, no clinical signs of disease or mortality were observed among wild birds. However, qRT-PCR analysis using H5-specific primers for fecal samples, followed by sequencing, confirmed the detection of the Highly Pathogenic Avian Influenza (HPAI) H5N1 subtype.

Source: WOAH, https://wahis.woah.org/#/in-review/6193

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#WHO DG's opening #remarks at the #media #briefing – 16 January 2025 {portion on avian #influenza}

 {Excerpt}

(...)

Now to the global spread of H5 avian influenza.

Last year, 66 cases of H5 were reported from the United States, plus 10 from Cambodia, 2 from Viet Nam and one each from Australia, Canada and China.

This is the highest number of reported human cases since 2015.


So far this year, 2 cases including 1 death have been reported in the United States, and 1 death in Cambodia.

Almost all these cases are associated with infected dairy cattle or poultry.

H5N1 is of particular concern because since the first human cases were reported in 2003, it has killed almost half of those it has struck.

Fortunately, H5N1 has not yet developed the ability to transmit easily between humans. But that could be only a matter of time.

Every transmission from one animal to another, or to a human, is an opportunity for the virus to mutate, or to mix with other influenza viruses.

It’s therefore imperative that the virus is not allowed to spread unchecked in animals.

WHO is working closely with the World Organisation for Animal Health and the Food and Agriculture Organization of the United Nations in a One Health approach to managing the threat of H5 globally.

We call on all countries to strengthen biosecurity on farms, testing and surveillance, and to provide personal protective equipment to farm workers who may be at risk.

We also call on all countries with outbreaks of H5 among animals to share viral samples and sequences with the WHO Global Influenza Surveillance and Response System, or GISRS.

(...)

Source: World Health Organization, https://www.who.int/news-room/speeches/item/who-director-general-s-opening-remarks-at-the-media-briefing---16-january-2025

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Thursday, January 16, 2025

#Human #Infection with Avian #Influenza A(#H9N2) Virus, #Vietnam, April 2024

Abstract

In April 2024, Vietnam confirmed its first human case of influenza A(H9N2) in a 37-year-old man, marking a critical point in regional infectious disease monitoring and response. This case underscores the importance of robust surveillance systems and One Health collaboration in managing emerging zoonotic threats.

Source: Emerging Infectious Diseases Journal, https://wwwnc.cdc.gov/eid/article/31/2/24-1146_article

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#US #CDC Health #Alert Network (HAN): Advisory, Accelerated Subtyping of #Influenza A in Hospitalized Patients



Summary

The Centers for Disease Control and Prevention (CDC) is issuing this Health Alert Network (HAN) Health Advisory to clinicians and laboratories due to sporadic human infections with avian influenza A(H5N1) viruses amid high levels of seasonal influenza activity

CDC is recommending a shortened timeline for subtyping all influenza A specimens among hospitalized patients and increasing efforts at clinical laboratories to identify non-seasonal influenza

Clinicians and laboratorians are reminded to test for influenza in patients with suspected influenza and, going forward, to now expedite the subtyping of influenza A-positive specimens from hospitalized patients, particularly those in an intensive care unit (ICU). This approach can help prevent delays in identifying human infections with avian influenza A(H5N1) viruses, supporting optimal patient care and timely infection control and case investigation.


Background

A panzootic of highly pathogenic avian influenza A(H5N1) viruses is currently affecting wild birds. 

In the United States, there have been outbreaks with these viruses among poultry and dairy cows, as well as infections among other animals. 

Since 2022, 67 total human cases of avian influenza A(H5) virus infection have been identified in the United States, with 66 of these cases occurring in 2024. 

Most infections in humans have been clinically mild, but one fatality has been reported. 

Many individuals infected with avian influenza A(H5) viruses have reported unprotected workplace exposures, such as handling infected or sick dairy cows or poultry without using recommended personal protective equipment. 

However, one case involved exposure to backyard poultry or wild birds. 

The source of the exposure in two confirmed cases in the United States could not be determined.

CDC has routinely recommended influenza testing for hospitalized patients with suspected influenza. 

In light of the ongoing avian influenza A(H5) virus animal outbreak in the United States, CDC now recommends subtyping of all influenza A virus-positive specimens from hospitalized patients on an accelerated basis. This accelerated subtyping is part of a comprehensive strategy to identify severe human infections with avian influenza A(H5) viruses, in addition to characterizing seasonal influenza viruses in a timely fashion.

Enhancing and expediting influenza A virus subtyping of specimens from hospitalized patients, especially from those in an ICU, can help avoid potential delays in identifying human infections with avian influenza A(H5) viruses. 

Such delays are more likely while seasonal influenza activity is high, as it is now, due to high patient volumes and general burden on healthcare facilities. 

Additional testing also ensures optimal patient care along with timely infection control. Furthermore, expediting transportation of such specimens to commercial or public health laboratories for additional testing may also accelerate public health investigation of severe A(H5) cases and sharing of information about these viruses.

Most influenza tests ordered in clinical settings do not distinguish avian influenza A(H5) viruses from seasonal influenza A viruses; a positive result simply confirms influenza A virus infection. Therefore, using tests that identify the seasonal influenza A virus subtype will help identify whether infection with a seasonal influenza A virus is present. 

If a test result is positive for influenza A virus but negative for seasonal influenza A virus subtypes [i.e., A(H1) and A(H3)], the virus detected might be a novel influenza A virus, such as influenza A(H5), and specimens should be prioritized for shipment to a public health laboratory for additional testing. 

Alternatively, there are now a few commercial laboratories offering influenza A(H5) subtyping in the clinical setting. 

Additionally, the Food and Drug Administration offers a list of influenza A typing and subtyping tests. Services like diagnostic and subtype testing that are reasonable and necessary to diagnose illness are covered in most cases by both public and private health insurers.

Subtyping is especially important in people who have a history of relevant exposure to wild or domestic animals infected or possibly infected with avian influenza A(H5N1) viruses.

CDC still considers the risk from avian influenza A(H5) viruses to the public to be low but is closely monitoring this dynamic situation. At this time, while seasonal influenza levels are high nationally, nearly all people who are currently hospitalized with influenza A virus infections probably have seasonal influenza.


Recommendations for Testing of Hospitalized Patients

In addition to jurisdiction-specific instructions for sending specimens for subtyping, CDC now recommends that all influenza A positive respiratory specimens from hospitalized patients, especially from those in an ICU, be subtyped for seasonal influenza A viruses [A(H1) and A(H3)] as soon as possible following admission—ideally within 24 hours—to support optimal patient care and proper infection prevention and control measures and to facilitate rapid public health investigation and action.


Recommendations for Clinicians

When collecting a thorough exposure history from a patient with suspected or confirmed influenza who is hospitalized, ask about potential exposure to wild and domestic animals, including pets (e.g., cats), and animal products (e.g., poultry, dairy cows, raw cow milk and raw cow milk products, raw meat-based pet food), or recent close contact with a symptomatic person with a probable or confirmed case of A(H5).

Implement appropriate infection control measures when influenza is suspected.

If avian influenza A(H5) virus infection is suspected, probable, or confirmed in a hospitalized patient, place the patient in an airborne infection isolation room with negative pressure with implementation by caregivers of standard, contact, and airborne precautions with eye protection (goggles or face shield).

Test for seasonal influenza A in hospitalized patients with suspected seasonal influenza or novel influenza A virus infection such as avian influenza A virus infection, using whatever diagnostic test is most readily available for initial diagnosis.

If the initial diagnostic test does not subtype [e.g., identify A(H1) and A(H3)], order an influenza A subtyping diagnostic test within 24 hours of hospital admission for patients who tested positive for influenza A.

Subtyping should be performed with assays available to the testing laboratory, as follows:

-- Subtyping tests should be performed in the hospital clinical laboratory, if available.

-- Alternatively, specimens should be sent to a commercial clinical laboratory.

-- If influenza A virus subtyping is not available through one of these routes, arrangements can made for influenza A virus-positive specimens to be subtyped at a public health laboratory.

Any hospitalized patients, especially those in an ICU, with suspected seasonal influenza or avian influenza A(H5) should be started on antiviral treatment with oseltamivir as soon as possible without waiting for the results of influenza testing.

Consider combination antiviral treatment for hospitalized patients with avian influenza A(H5) virus infection.

Notify the health department promptly if avian influenza A(H5N1) virus infection is suspected, probable, or confirmed in a hospitalized patient.

Questions about appropriate clinical management or testing of hospitalized patients with novel influenza A virus infection [e.g., A(H5)], including about combination antiviral treatment dosing or testing for antiviral resistance, can be directed to the CDC Influenza Division for consultation with a medical officer via the CDC Emergency Operations Center at 770-488-7100.


Recommendations for Clinical Laboratories

Subtype and send respiratory specimens that are positive for influenza A but negative for seasonal influenza A virus subtypes [i.e., negative for A(H1) and A(H3)] to a public health laboratory as soon as possible and within 24 hours of obtaining the results. Do not batch specimens for consolidated or bulk shipment to the public health laboratory if that would result in shipping delays for any such specimen.

If influenza A virus subtyping is not available at the hospital or the clinical laboratory of the treating facility, public health officials should be notified, and arrangements made for influenza A virus-positive respiratory specimens to be subtyped at a public health laboratory or a commercial laboratory with this testing capability. Specimens should be clearly linked to clinical information from the patient to ensure specimens from severely ill and ICU patients are prioritized.

Immediately contact the state, tribal, local, or territorial public health authority if a positive result for influenza A(H5) virus is obtained using a laboratory developed test (LDT) or another A(H5) subtyping test to initiate important time-critical actions.


Recommendations for Public Health Laboratories

Complete influenza A virus subtyping assays within 24 hours of receipt and report results to CDC, as required.


Recommendations for the Public

People should avoid direct contact with wild birds and other animals infected with or suspected to be infected with avian influenza A viruses.

If you must have direct or close contact with infected or potentially infected birds or other animals, wear recommended personal protective equipment (PPE).

Additional information on protecting yourself from avian influenza A(H5) infection is available from CDC.

(...)

Source: US Centers for Disease Control and Prevention, https://www.cdc.gov/han/2025/han00520.html?ACSTrackingID=USCDC_486-DM142615&ACSTrackingLabel=HAN%20520%20-%20Health%20Advisory%20(for%20COCA%20partners)&deliveryName=USCDC_486-DM142615

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Prior #influenza virus #infection alleviates an #arbovirus #encephalitis by reducing viral titer, #inflammation, and cellular infiltrates in the central nervous system

ABSTRACT

Respiratory and encephalitic virus infections represent a significant risk to public health globally. Detailed investigations of immunological responses and disease outcomes during sequential virus infections are rare. Here, we define the impact of influenza virus infection on a subsequent virus encephalitis. We used a model system in which mice were given influenza A virus (IAV) infection 8 days prior to Semliki Forest virus (SFV) infection (IAV→SFV). IAV infection clearly attenuated the subsequent SFV infection with reduced titers of infectious SFV and lower levels of cytokines and chemokines in the central nervous system (CNS). In contrast, the SFV viremia in both IAV→SFV and SFV-only mice was comparable. Increased type I interferon (IFN) levels in the CNS after IAV infection might have contributed to some level of protection towards SFV infection in the CNS, suggesting that early control of SFV replication in the CNS during IAV→SFV infection led to reduced adaptive response, given the lower number of CD8+ T cells recruited to the brain in IAV→SFV infection. In lungs, however, prior IAV infection elicited effector CD8+ T cells with highly activated CD38 and/or CD25 phenotypes, while SFV-only infection elicited distinct effector CD8+ T cells with increased frequencies of KLRG1 expression, a hallmark of short-lived effector T cells. Taken together, our findings demonstrate that prior IAV infection can confer protective immunity toward secondary SFV infection, confirmed by reduced disease severity and inflammatory immune responses in the brain. Our work provides important insights into therapies and vaccine regimens directed against unrelated pathogens.

Source: Journal of Virology, https://journals.asm.org/doi/full/10.1128/jvi.02108-24?af=R

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#Neurotropic #Tick-Borne #Flavivirus in Alpine #Chamois (Rupicapra rupicapra rupicapra), #Austria, 2017, #Italy, 2023

Abstract

The European subtype of tick-borne encephalitis virus (TBEV-Eur; species Orthoflavivirus encephalitidis, family Flaviviridae) was the only tick-borne flavivirus present in central Europe known to cause neurologic disease in humans and several animal species. Here, we report a tick-borne flavivirus isolated from Alpine chamois (Rupicapra rupicapra rupicapra) with encephalitis and attached ticks, present over a wide area in the Alps. Cases were detected in 2017 in Salzburg, Austria, and 2023 in Lombardy and Piedmont, Italy. The virus strains exhibit 94.8–97.3% nucleotide identities to each other and are more closely related to Louping ill viruses (LIV; Orthoflavivirus loupingi; 90–92% identities) than to TBEV-Eur (less than 88%). The chamois-derived virus strains, tentatively termed “Alpine chamois encephalitis virus”, form a well-supported independent genetic clade with Spanish goat encephalitis virus, clearly separated from other LIV. This supports its designation as a new virus subtype with the proposed shared taxonomic name “Spanish goat and Alpine chamois encephalitis virus subtype” within the species Orthoflavivirus loupingi. The zoonotic potential of this newly identified virus subtype as well as its host range in other animal species including farm animals needs to be further investigated.

Source: Viruses, https://www.mdpi.com/1999-4915/17/1/122

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Immunization with a novel #RNA replicon #vaccine confers long-lasting #protection against #H5N1 avian #influenza virus in 24 #bird species

Abstract

Highly pathogenic avian influenza viruses (HPAIV) of subtype H5N1 (clade 2.3.4.4b) have spread worldwide and caused the death of hundreds of millions of wild birds and domestic poultry. Moreover, spill over of H5N1 HPAIV from infected birds to more than 50 different mammalian species including humans has been recorded. While, licensed vaccines for protection of avian or mammalian species are not yet available, a few candidate vaccines are being trialled. Here, we report on the experimental vaccination of chickens and captive wild birds using a propagation-defective vesicular stomatitis virus (VSV), in which the essential envelope glycoprotein (G) protein gene was replaced by a modified hemagglutinin gene derived from a clade 2.3.4.4b H5N1 isolated in 2022 in the animal park of Bern, Switzerland. VSV∆G(H5mb) was produced on helper cells providing the VSV G protein in trans. Specific pathogen-free (SPF) chickens that were immunized twice via the intramuscular route with adjuvant-free VSV∆G(H5mb) replicon particles induced high levels of virus-neutralizing serum antibodies and were fully protected against lethal infection by H5N1 HPAIV (clade 2.3.4.4b). Notably, immunized animals did not shed challenge virus from the respiratory or gastrointestinal tract, suggesting that herd immunity can be achieved. The same vaccine was used to immunize a total of 317 captive wild birds at Bern Animal Park and Zoo Basel, representing 24 different species. No vaccine-associated side effects were observed. Birds without previous contact to H5Nx viruses produced high to very high H5-specific neutralizing antibody titers following the second immunization, while birds showing H5-specific antibodies prior to vaccination, already developed high neutralizing antibody titers after a single immunization. One year after vaccination, most animals still showed significant neutralizing antibody titers, indicating that VSV∆G(H5mb) is able to induce a long-lasting protective immune response. Our results indicate that VSV∆G(H5mb) is an extraordinary safe and highly efficacious vaccine to stop H5N1 replication in various avian species.

Source: BioRxIV, https://www.biorxiv.org/content/10.1101/2025.01.15.633174v1

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#PuertoRico - High pathogenicity avian #influenza #H5N1 viruses (#poultry) (Inf. with) - Immediate notification

Highly pathogenic avian influenza (HPAI) H5N1 clade 2.3.4.4b was confirmed on one poultry premises in Culebra Municipality, Puerto Rico. This is the first confirmed case of HPAI in poultry from Puerto Rico. Full genotyping confirms the virus as a reassortant of the A3 genotype with North American wild bird lineage viruses (AM PB2, PA, NP). Comparisons of the virus to other recent detections from wild birds and North America reports are in progress. The USDA Animal and Plant Health Inspection Service (APHIS), in conjunction with State Animal Health and Wildlife Officials, are conducting comprehensive epidemiological investigations and enhanced surveillance in response to the HPAI H5N1 related events.

Source: WOAH, https://wahis.woah.org/#/in-review/6185

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#USA, #Hawaii: Dept. of Health Closely Monitoring Detection of #H5 Avian #Influenza in Kauai #Wastewater

{Excerpt}

HONOLULU — The Hawai‘i Department of Health (DOH) State Laboratories Division has detected H5 avian influenza (bird flu) at very low levels in wastewater samples collected at the LÄ«huÊ»e Wastewater Treatment Plant on KauaÊ»i.


The first detection was from a sample collected on Dec. 11, 2024, that was so low that it was not considered a positive result. 

Samples collected on Dec. 18, 2024 and Jan. 8, 2025 had similar detections. 

While none is considered a positive result, the consistent very low-level detections indicate a high likelihood that H5 bird flu virus is on KauaÊ»i. 

No H5 virus infections of birds, dairy cows, or humans have been detected on KauaÊ»i to date. 

Detection of infected birds in the state has so far been limited to Oʻahu.

The H5 bird flu viruses include the H5N1 subtype of bird flu virus that has spread globally in birds since its initial discovery in 1996 and recently has been detected in several mammal species including dairy cows. Wastewater testing cannot determine if the detection is specifically this H5N1 subtype of bird flu virus.

The presence of the H5N1 bird flu virus in Hawaiʻi was first confirmed in November 2024 in a backyard flock of birds in Central Oʻahu. That virus strain was a different genotype of the virus that has infected birds and dairy cows on the U.S. mainland. H5 was subsequently detected at the Hilo Wastewater Treatment Plant on Hawaiʻi Island.

While the risk to the public remains low, bird flu can cause severe illness with a high mortality rate among certain bird populations such as poultry. Commercial poultry producers and residents with backyard flocks are strongly advised to increase biosecurity measures to reduce the likelihood of infection. Bird flu can also infect dairy cows. While pasteurized milk is safe, raw milk should be avoided.

The Hawaiʻi Department of Agriculture (HDOA) recommends the following for residents that need to remove a dead wild bird from their property:

-- Wear disposable gloves or turn a plastic bag inside out and use it to pick up the carcass.

-- Double-bag the carcass and throw it out with the regular trash.

-- Wash your hands and disinfect your clothing and shoes after handling a dead wild bird.

-- Be mindful of any health symptoms that may develop afterward.

To report multiple or unusual illnesses in poultry, livestock, or other wild birds or animals from any island in the state, contact HDOA Animal Industry Division at 808-483-7100 or, email: hdoa.ldc@hawaii.gov, Monday to Friday from 7:45 a.m. to 4:30 p.m., or 808-837-8092 during non-business hours and holidays.

Residents who believe they may have been exposed to sick birds or other wildlife should contact the Disease Outbreak Control Division Disease Reporting Line at 808-586-4586 for additional guidance.

(...)

Source: Department of Health, https://health.hawaii.gov/news/newsroom/doh-closely-monitoring-detection-of-h5-avian-flu-in-kaua%ca%bbi-wastewater/

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Wednesday, January 15, 2025

#USA, #California: Current #H5N1 #Influenza in #Human #Situation as of January 15 '25: One new case, total = 38

Current Bird Flu Situation

Updated January 15, 2025​

-- ​​​​The current risk to the public remains low.  ​​

-- No person-to-person spread of bird flu has been detected in California. 

-- People rarely get bird flu, but those who interact​ with infected dairy cows, poultry, or wildlife ​have a greater risk of infection.​​

-- Pasteurized milk and dairy products are safe to consume. Pasteurization inactivates the bird flu virus.​​

-- CDPH is working to protect public health related to bird flu. We monitor infection data, evolving science, and the people affected. Our knowledge will change as we learn more. We are committed to reducing the impact to those at highest risk.


Human Cases in Califo​rnia​

-- ​​​​​​​Confirmed Human Cases​38 {+1}

​These numbers were last updated on January 15, 2025.

California has 1 additional probable case with dairy cow exposure that meets the  Council of State and Territorial Epidemiologists (CSTE) ​probable case definition (PDF)​. That case tested positive by a local lab and confirmatory testing at CDC was negative.​​


Confirmed human case summary during the 2024 outbreak, by exposure source.

​-- Cattle​​​​: ​36

-- ​Poultry: ​0

-- ​Unkn​own: ​2

--- ​Total: ​38

(...)

Source: Department of Health, https://www.cdph.ca.gov/Programs/CID/DCDC/Pages/Bird-Flu.aspx

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#USA, US #CDC: #H5 #Birdflu #Response: Focus Areas for Ongoing Public Health #Risk #Assessment



{Edited}

Current H5N1 bird flu risk

People who are at increased risk include:

-- Farmers and workers who work with infected animals or their byproducts

-- Backyard bird flock owners

-- Animal care workers (e.g., veterinarians, wild animal facility workers)

-- Animal health and public health responders.

But what factors would influence a change to CDC’s current risk assessment for the general public? What follows is a description of the epidemiological and virologic characteristics of the avian influenza situation that CDC scientists are tracking to formulate the agency’s immediate avian flu risk assessment and further calibrating the avian flu response to protect the public’s health:

-- Virus transmission: How is virus spreading and how efficiently does it spread?

-- Disease severity: How ill do people with H5N1 bird flu infections become?

-- Case distribution: How widespread are cases?

-- Effects of genetic changes in the virus: What is the impact of genetic changes to the virus on infectivity or transmissibility, the accuracy of diagnostic tests, and effectiveness of antiviral drugs and vaccines?


Virus transmission

What is CDC on the lookout for? 

Sustained human-to-human transmission outside of a household increases the likelihood of significant public health impact.

Influenza A(H5N1) has been spreading in wild birds globally since the mid-1990s and in the United States since 2014. The virus initially spread to commercial and backyard poultry and has also infected mammals, including minks, sea lions and now dairy cattle. 

There have been sporadic human cases both in the United States and in other countries, and limited human-to-human transmission of avian influenza has been occasionally reported globally. 

To date, there is no evidence of human-to-human transmission associated with the current avian influenza situation in the United States

Transmission identified outside of a household would be of greater concern than within a household when assessing immediate public health risk.

Beyond looking out for human-to-human transmission through case investigation, CDC continues to rapidly analyze and share genetic sequences of samples from human cases and, alongside information gained from viral samples from infected animals, is monitoring for changes that would allow the virus to spread more easily—particularly to humans and other mammals.


Disease severity

What is CDC on the lookout for? 

CDC is concerned about all people who become infected with avian flu and is particularly concerned if we begin seeing people who quickly become severely ill and require hospitalization or who die of the infection. 

Severe disease may indicate the virus has changed and is now better able to make people severely ill. 

This degree of severity could have a greater public health impact, straining the healthcare system and may have other societal and economic impacts (e.g., if people cannot work).

Most cases of H5N1 bird flu associated with the ongoing outbreak in the United States have resulted in mild symptoms

CDC experts and other scientists continue to work to understand why some infections, including an infection reported in Canada and one reported in Louisiana, resulted in serious illness. 

Severity of illness can be impacted by a number of factors, including acquired genetic changes of the virus, the amount of virus to which the infected people were exposed, the route of transmission, underlying health conditions, how long the person was sick and the timeliness of medical care/treatment, or some combination of all these factors.


Case distribution

What is CDC on the lookout for? 

Indication that that virus may have broad dissemination among humans within specific populations or to the general population, or increasing numbers of people who are becoming infected without clear exposure to infected animals.

Human cases associated with the ongoing outbreak have been sporadic, and nearly all have followed identifiable exposures to dairy cows, poultry, and/or other animals.

Broad dissemination of cases would be evident if all of the following were to occur:

-- Numerous sporadic (i.e., occurring at irregular intervals or infrequently as isolated events) human cases unrelated to expected shared/common animal exposures

-- Cases occurring in multiple geographic locations

-- Cases occurring close together in time


Effects of genetic changes in the virus

What is CDC on the lookout for? 

Genetic changes known to be associated with increased severity or transmissibility or other viral changes seen at the same time as increased transmissibility and increasing severity of infection.

CDC conducts routine assessment of the sequences of the viruses from humans and animals for changes that might impact infectivity or transmissibility in humans, the accuracy of diagnostic tests and the effectiveness of vaccines or antivirals. 

To date, genetic analysis has not identified changes in viruses compared to available clade 2.3.4.4b candidate vaccine viruses (CVVs) that would be predicted to impact cross-protection if A(H5) vaccines were needed for use in humans. 

Nor have changes been identified in the receptor binding domain of viruses except for low frequency changes in the fatal case from Louisiana and the severe case from Canada

These changes were believed to have occurred after the individuals were infected rather than acquired from their infecting exposure. 

There is no evidence that viruses with these changes spread beyond these patients.

Collectively, these data indicate that A(H5N1) viruses circulating in animals retain avian receptor binding properties with no significant changes that would impact infectivity or transmissibility in humans

Additionally, there have been only a few sporadic changes identified in viruses detected in animals or humans associated with mammalian adaptation or slightly reduced susceptibility to commercially available antiviral drugs. 

Finally, no changes have been identified in viruses that impact the performance of H5 influenza diagnostic tests that are used for testing across all U.S. states and at CDC.

These factors are all important considerations that inform what public health actions should be implemented in the H5 avian flu public health response. 

Should we see concerning changes in these factors, additional actions may be necessary to protect the health and safety of people with potential animal exposures as well as the general public. 

Additional actions may include but are not limited to:

-- Updating guidance to better protect those who may be exposed to H5 avian flu, such as who should receive pre- or post-exposure prophylaxis, testing strategy, and how to best use personal protective equipment.

-- Procuring additional treatments and vaccines, to ensure we have sufficient supply for those who would benefit from their use.

-- Initiating a voluntary H5 vaccination program focused on people with predictable exposure to the virus.

-- Initiating a broader voluntary H5 vaccination program if the possibility of widespread transmission or increasing disease severity is found.

Such escalation will likely require additional resources.

(...)

Source: US Centers for Disease Control and Prevention, https://www.cdc.gov/bird-flu/spotlights/h5n1-response-01142025.html

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#USA, Confirmed #H5N1 #influenza #human case summary since 2024, by state and exposure source: 1 new case in CA, total now = 67



{Excerpt}

Exposure Source

[State - Exposure Associated with Commercial Agriculture and Related Operations: Dairy Herds (Cattle) - Poultry Farms and Culling Operations -- Other Animal Exposure† - Exposure Source Unknown‡ - State Total]

1) California - 36 - 0 - 0 - 2 - 38 {+1}

2) Colorado - 1 - 9 - 0 - 0 - 10

3) Iowa - 0 - 1 - 0 - 0 - 1

4) Louisiana - 0 - 0 - 1 - 0 - 1

5) Michigan - 2 - 0 - 0 - 0 - 2

6) Missouri - 0 - 0 - 0 - 1 - 1

7) Oregon - 0 - 1 - 0 - 0 - 1

8) Texas - 1  - 0 - 0 - 0 - 1

9) Washington - 0 - 11 - 0 - 0 - 11

10) Wisconsin - 0 - 1 - 0 - 0 - 1

-- Source Total - 40 - 23 - 1 - 3 - 67 {+1}

NOTE: One additional case was previously detected in a poultry worker in Colorado in 2022. Louisiana reported the first H5 bird flu death in the U.S.

{†} Exposure was related to other animals such as backyard flocks, wild birds, or other mammals

{‡} Exposure source was not able to be identified


Probable human case summary during the 2024 outbreak, by state and exposure source

When a case tests positive for H5 at a public health laboratory but testing at CDC is not able to confirm H5 infection, per Council of State and Territorial Epidemiologists (CSTE) guidance, a case is reported as probable.

-- Probable cases with commercial poultry exposure (e.g., poultry farms or culling operations):

1) Washington (3)

2) Arizona (2)

Probable cases with commercial dairy (cattle) exposure:

1) California (1)

Probable cases with exposure source unknown:

1) Delaware (1)

Confirmed and probable cases are typically updated by 5 PM EST on Mondays (for cases confirmed by CDC on Friday, Saturday, or Sunday), Wednesdays (for cases confirmed by CDC on Monday or Tuesday), and Fridays (for cases confirmed by CDC on Wednesday and Thursday). Affected states may report cases more frequently.

(...)

Source: US Centers for Disease Control and Prevention, https://www.cdc.gov/bird-flu/situation-summary/?CDC_AAref_Val=https://www.cdc.gov/flu/avianflu/avian-flu-summary.htm

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#Pathogenesis of #bovine #H5N1 clade 2.3.4.4b #infection in #Macaques

Abstract

Since early 2022 highly pathogenic avian influenza (HPAI) H5N1 virus infections have been reported in wild aquatic birds and poultry throughout the United States (US) with spillover into several mammalian species1-6. In March 2024, HPAIV H5N1 clade 2.3.4.4b was first detected in dairy cows in Texas, US and continues to circulate on dairy farms in multiple states7,8. Milk production and quality are diminished in infected dairy cows, with high virus titers in milk raising concerns of exposure to mammals including humans through consumption9-12. Here we investigated routes of infection with bovine HPAIV H5N1 clade 2.3.4.4b in cynomolgus macaques, a surrogate model for human infection13. We show that intranasal or intratracheal inoculation of macaques could cause systemic infection resulting in mild and severe respiratory disease, respectively. In contrast, infection by the orogastric route resulted in limited infection and seroconversion of macaques which remained subclinical.

Source: Nature, https://www.nature.com/articles/s41586-025-08609-8

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Clinical #Features of #Human #Parvovirus B19-Associated #Encephalitis Identified in the #Dakar Region, #Senegal, and Viral Genome Characterization

Abstract

Neurological manifestations associated with human parvovirus B19 (B19V) infections are rare and varied. Acute encephalitis and encephalopathy are the most common, accounting for 38.8% of all neurological manifestations associated with human B19V. Herein, we report on the clinical features of 13 laboratory-confirmed human cases of B19V-associated encephalitis in Senegal in the framework of a hospital-based surveillance of acute viral encephalitis conducted from 2021 to 2023. Overall, B19V was detected from 13 cerebrospinal fluid samples using specific real time PCR. The mean age was 16.7 years among B19V-positive patients, with a higher prevalence in 0–5-year-old children and the sex ratio (male/female) was 2.25. The B19V-positive patients mainly exhibited hypoleukocytosis, normal glycorrhachia, and normal proteinorrachia in the cerebrospinal fluid. While the main neurological symptoms included meningeal and infectious syndromes. Furthermore, three complete B19V genome sequences were successfully characterized using next-generation sequencing. The newly characterized sequences belonged to the genotype 1a and represent, to date, the first complete B19V genome sequences from Senegal. These sequences could be useful not only in future phylodynamic studies of B19V but also in the development of prevention or treatment countermeasures. Our study is noteworthy for the identification of acute B19V-associated encephalitis in Senegal More investigations on the risk factors associated with B19V transmission in Africa are warranted.

Source: Viruses, https://www.mdpi.com/1999-4915/17/1/111

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#Germany - High pathogenicity avian #influenza #H5N1 viruses (#poultry) (Inf. with) - Immediate notification

 A fattening turkeys farm in Baden-WĂ¼rttemberg Region.

Source: WOAH, https://wahis.woah.org/#/in-review/6188

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Clade 2.3.4.4b but not historical clade 1 #HA replicating #RNA #vaccine protects against #bovine #H5N1 challenge in #mice

Abstract

The ongoing circulation of influenza A H5N1 in the United States has raised concerns of a pandemic caused by highly pathogenic avian influenza. Although the United States has stockpiled and is prepared to produce millions of vaccine doses to address an H5N1 pandemic, currently circulating H5N1 viruses contain multiple mutations within the immunodominant head domain of hemagglutinin (HA) compared to the antigens used in stockpiled vaccines. It is unclear if these stockpiled vaccines will need to be updated to match the contemporary H5N1 strains. Here we show that a replicating RNA vaccine expressing the HA of an H5N1 isolated from a US dairy cow confers complete protection against homologous lethal challenge in mice. A repRNA encoding the HA of a clade 1 H5 from 2004 (A/Vietnam/1203/2004) as utilized by some stockpiled vaccines, confers only partial protection. Our data highlight the utility of nucleic acid vaccines to be rapidly updated to match emergent viruses of concern while demonstrating that contemporary bovine H5N1 viruses can evade immunity elicited by historical HA antigens.

Source: Nature Communication, https://www.nature.com/articles/s41467-024-55546-7

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GGCX promotes #Eurasian #avian-like #H1N1 #swine #influenza virus #adaption to interspecies #receptor binding

Abstract

The Eurasian avian-like (EA) H1N1 swine influenza virus (SIV) possesses the capacity to instigate the next influenza pandemic, owing to its heightened affinity for the human-type α-2,6 sialic acid (SA) receptor. Nevertheless, the molecular mechanisms underlying the switch in receptor binding preferences of EA H1N1 SIV remain elusive. In this study, we conduct a comprehensive genome-wide CRISPR/Cas9 knockout screen utilizing EA H1N1 SIV in porcine kidney cells. Knocking out the enzyme gamma glutamyl carboxylase (GGCX) reduces virus replication in vitro and in vivo by inhibiting the carboxylation modification of viral haemagglutinin (HA) and the adhesion of progeny viruses, ultimately impeding the replication of EA H1N1 SIV. Furthermore, GGCX is revealed to be the determinant of the D225E substitution of EA H1N1 SIV, and GGCX-medicated carboxylation modification of HA 225E contributes to the receptor binding adaption of EA H1N1 SIV to the α-2,6 SA receptor. Taken together, our CRISPR screen has elucidated a novel function of GGCX in the support of EA H1N1 SIV adaption for binding to α-2,6 SA receptor. Consequently, GGCX emerges as a prospective antiviral target against the infection and transmission of EA H1N1 SIV.

Source: Nature Communications, https://www.nature.com/articles/s41467-025-55903-0

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#Outbreak of suspected #Marburg Virus Disease - United Republic of #Tanzania



Description of the situation

Introduction

On 13 January 2025, WHO informed its Member States and IHR State Parties of an outbreak of suspected Marburg Virus Disease (MVD) in the Kagera region of the United Republic of Tanzania using our secure web-based platform—the Event Information Site (EIS). Under the International Health Regulations, the EIS is used to issue rapid alerts to Member States of acute and rapidly developing public health risks and events with possible international implications.


Summary of the situation

On 10 January 2025, WHO received reliable reports from in-country sources regarding suspected cases of MVD in the Kagera region of the United Republic of Tanzania. Six people were reported to have been affected, five of whom had died. The cases presented with similar symptoms of headache, high fever, back pain, diarrhoea, haematemesis (vomiting with blood), malaise (body weakness) and, at a later stage of disease, external haemorrhage (bleeding from orifices).

As of 11 January 2025, nine suspected cases were reported including eight deaths (case fatality ratio (CFR) of 89%) across two districts – Biharamulo and Muleba.  Samples from two patients have been collected and tested by the National Public Health Laboratory. Results are pending official confirmation. Contacts, including healthcare workers, are reported to have been identified and under follow-up in both districts.

The Bukoba district in Kagera region experienced its first MVD outbreak in March 2023, and zoonotic reservoirs, such as fruit bats, remain endemic to the area. The outbreak in March 2023 lasted for nearly two months with nine cases including six deaths.


Public health response

National rapid response teams have been deployed to support outbreak investigation and response; surveillance activities have been intensified with contact tracing ongoing; laboratory samples from recent cases have been sent for confirmation at the National Public Health Laboratory. A mobile laboratory is located in Kagera region and treatment units have reportedly been established.


WHO risk assessment

The risk of this suspected MVD outbreak is assessed as high at the national level due to several concerning factors. The suspected outbreak thus far involves at least nine suspected cases, including eight deaths, resulting in a high CFR of 89%. Healthcare workers are included among the suspected cases affected, highlighting the risk of nosocomial transmission. The source of the outbreak is currently unknown.

The reporting of suspected MVD cases from two districts suggests geographic spread. The delayed detection and isolation of cases, coupled with ongoing contact tracing, indicates lack of a full information of the current outbreak. More cases are expected to be identified.

The regional risk is considered high due to Kagera region's strategic location as a transit hub, with significant cross-border movement of the population to Rwanda, Uganda, Burundi and the Democratic Republic of the Congo. Reportedly, some of the suspected cases are in districts near international borders, highlighting the potential for spread into neighbouring countries.  MVD is not easily transmissible (i.e. in most instances, it requires contact with the body fluids of a sick patient presenting with symptoms or with surfaces contaminated with these fluids). However, it cannot be excluded that a person exposed to the virus may be travelling.

The global risk is currently assessed as low. There is no confirmed international spread at this stage, although there are concerns about potential risks. Kagera region, while not close to Tanzania's capital or major international airports, is well-connected through transportation networks, and has an airport that connects to Dar es Salaam for onward travel outside Tanzania by air. This highlights the need for enhanced surveillance and case management capacities at relevant points of entry and borders, and close coordination with neighbouring countries to strengthen readiness capacities.


WHO advice

Human-to-human transmission of Marburg virus is primarily associated with direct contact with the blood and/or other bodily fluids of infected people. WHO advises the following risk reduction measures be taken as an effective way to reduce MVD transmission and control an outbreak.

* Prevention: Protective measures individuals should take to reduce human exposure to the virus include:

-- Reduce the risk of human-to-human transmission in the community arising from direct or close contact with infected patients, particularly with their body fluids. Close physical contact with MVD patients should be avoided.

-- People suspected or confirmed for MVD should immediately seek care in health facilities and be isolated in a designated treatment centre for early care and to avoid transmission at home. 

-- Community and family members should avoid caring for symptomatic individuals at home, and avoid touching bodies of people deceased with MVD symptoms. They should avoid touching other potentially contaminated items and surfaces. They should be encouraged to go to a health facility for assessment and treatment if they have symptoms.

-- Reduce the risk of bat-to-human transmission arising from prolonged exposure to mines or caves inhabited by fruit bat colonies. During work or research activities or tourist visits in mines or caves inhabited by fruit bat colonies, people should wear gloves and other appropriate protective clothing (including masks). During outbreaks, all animal products (blood and meat) should be thoroughly cooked before consumption.

* Coordination: Multisectoral coordination and pillar meetings at all levels and sharing of detailed situation reports is encouraged. Involvement of different stakeholders and partners in preparedness and response activities is also encouraged. To ensure an effective and sustained response, resource mobilization efforts within the government and with partners are recommended.

* Risk communication and community engagement: Raising public awareness and engaging with communities are important for successfully controlling MVD outbreaks. This includes raising awareness of symptoms, risk factors for infection, protective measures and the importance of seeking immediate care at a health facility. Sensitive and supportive information about safe and dignified burials is also crucial. This awareness should be increased through targeted campaigns and direct work with communities. Special attention should be given to high-risk groups, such as traditional healers, clergy, and community leaders, who may inadvertently facilitate disease spread, and who are important sources of information for the community. Misinformation and rumours should be addressed to foster trust and promote early symptom reporting.

* Surveillance: Active case detection, contact tracing, and alert management across affected and neighbouring regions should be intensified. Community-based surveillance systems should be strengthened to promptly identify and report new cases, particularly in high-risk areas. Close monitoring of healthcare workers, family members and individuals who have had contact with suspected cases or other high-exposure settings should be ensured. Surveillance capacities should also be intensified at relevant points of entry and borders to reduce the risk of further spread, including internationally.

* Infection prevention and control (IPC) measures: critical infection prevention and control measures should be implemented and/or strengthened in all health care facilities, per WHO’s Infection prevention and control guideline for Ebola and Marburg disease, which highlighted the importance of the rapid implementation of the IPC ring approach including but not limited to IPC rapid assessment, decontamination of the health facilities and household and early detection and identification of the cases through the screening and isolation of the suspected cases to minimize the transmission risk.

* Health workers caring for patients with confirmed or suspected MVD should apply transmission-based precautions in addition to: standard precautions, including appropriate use of personal protective equipment (PPE) and hand hygiene according to the WHO 5 moments to avoid contact with patient’s blood and other body fluids and with contaminated surfaces and objects. Waste generated in healthcare facilities must be safely segregated, safely collected, transported, stored, treated and finally disposed. Follow the national guidelines, rules and regulations for safe waste disposal or follow the WHO’s guidelines on safe waste management 

* Patient-care activities should be undertaken in a clean and hygienic environment that facilitates practices related to the prevention and control of health-care-associated infections (HAIs) as outlined in Essential environmental health standards in health care. Safe water, adequate sanitation and hygiene infrastructure and services should be provided in healthcare facilities. For details on recommendations and improvement, follow the WASH FIT implementation Package

* Laboratory testing: The processing and analysis of samples should be expedited, with results promptly shared with responders and clinicians to guide patient management, containment strategies and broader response efforts. This includes genomic sequencing on positive samples. International referral of samples to a regional reference laboratory should be considered for inter-laboratory comparison.

* Evaluation of candidate medical countermeasures: There are no licensed vaccines or therapeutics against MVD. Several candidate vaccines are in the pipeline and outbreaks offer an opportunity to assess their efficacy and safety. There are protocols available and a network of experts in filovirus ready to support national researchers. 

* Safe and dignified burials: Safe and dignified burial protocols should be implemented for people who have died to minimize community exposure. Additional training and equipment for healthcare workers and burial teams should be provided to ensure safe management of MVD-related fatalities. Thorough community engagement is required to ensure that affected communities are empowered to adhere to the protocol.

* Case management and mental health and psychosocial support: Isolation and treatment facilities should be adequately equipped to ensure the safety and efficacy of patient care, while simultaneously preventing the spread of the disease. Supportive care such as rehydration, symptom management, and psychological support for patients and their families is essential to improving survival rates and mitigating the outbreak's impact.

* Border health and cross-border coordination: Surveillance and response capacities should be strengthened at relevant points of entry, onboard conveyances, and in border regions to prevent further spread, including internationally. Cases, contacts and individuals in affected areas who present signs and symptoms compatible with case definitions should be advised not to travel in line with WHO’s border health and points of entry technical guidance for filovirus disease outbreaks. Collaboration with neighbouring countries should be enhanced to harmonize reporting mechanisms, conduct joint investigations, and share critical data in real-time. Surrounding countries should enhance readiness activities to enable early case detection, isolation and treatment.

* Preparedness and Readiness: Readiness assessments in high-risk regions should be conducted to ensure response mechanisms, such as mobile labs and isolation units, are adequately equipped to manage new cases.

Based on the current risk assessment, WHO advises against any travel and trade restrictions with the United Republic of Tanzania.


Further information

-- WHO Factsheet- Marburg virus disease https://www.who.int/news-room/fact-sheets/detail/marburg-virus-disease

-- Infection prevention and control guidelines for Ebola and Marburg disease, August 2023.  https://www.who.int/publications/i/item/WHO-WPE-CRS-HCR-2023.1

- WHO Questions and Answers – Marburg virus disease.https://www.who.int/news-room/questions-and-answers/item/marburg-virus-disease  Risk communication and community engagement for Marburg virus disease outbreaks. Interim Guidance November 2024.  https://iris.who.int/bitstream/handle/10665/379761/B09185-eng.pdf?sequence=1

-- Steps to putting on PPE for Ebola/Marburg coverall.  https://www.who.int/multi-media/details/steps-to-put-on-ppe-for-ebola-marburg-disease-coverall

-- Steps to removing PPE for Ebola/Marburg disease coverall.  https://www.who.int/multi-media/details/steps-to-remove-ppe-for-ebola-marburg-disease-coverall

-- Steps to putting on PPE for Ebola/Marburg gown and headcover.  https://www.who.int/multi-media/details/steps-to-put-on-ppe-for-ebola-marburg-disease-gown-and-headcover

-- Steps to removing PPE for Ebola/Marburg gown and headcover.  https://www.who.int/multi-media/details/steps-to-remove-ppe-for-ebola-marburg-disease-gown-and-headcover

-- Standard precautions for the prevention and control of infections: aide-memoire.  https://www.who.int/publications/i/item/WHO-UHL-IHS-IPC-2022.1

-- Transmission-based precautions for the prevention and control of infections: aide-memoire.  https://www.who.int/publications/i/item/WHO-UHL-IHS-IPC-2022.2

-- Essential environmental health standards in healthcare facilities- https://www.who.int/publications/i/item/9789241547239 

-- WASH FIT implementation for WASH improvements in healthcare facilities WASH FIT Fact Sheets | WASH in Health Care Facilities (washinhcf.org) https://www.washinhcf.org/wash-fit-fact-sheets/

-- World Health Organization (March 2009). Hand hygiene technical reference manual: to be used by health-care workers, trainers and observers of hand hygiene practices.  https://www.who.int/publications/i/item/9789241598606

-- Ebola and Marburg diseases screening and treatment center design training.  https://openwho.org/courses/ebola-marburg-screen-treat-facilities

-- World Health Organization (2 June 2023). Disease Outbreak News; Marburg virus disease in the United Republic of Tanzania.  https://www.who.int/emergencies/disease-outbreak-news/item/2023-DON471

-- Markotter W, Coertse J, DeVries M, et al.  Bat-borne viruses in Africa: a critical review. J of Zoology. 2020;311:77-98. doi:10.1111/jzo.12769.  https://zslpublications.onlinelibrary.wiley.com/doi/10.1111/jzo.12769(link is external)

-- Korine C Rousettus aegyptiacus. The IUCN Red List of Threatened Species 2016: e.T29730A22043105. https://www.iucnredlist.org/species/29730/22043105

-- Cross RW, Longini IM, Becker S, Bok K, Boucher D, Carroll MW, et al. (2022) An introduction to the Marburg virus vaccine consortium, MARVAC. PLoS Pathog 18(10): e1010805. https://doi.org/10.1371/journal.ppat.1010805

-- A WHO-Strategic Research Agenda for Filovirus Research and Monitoring (WHO-AFIRM). https://www.who.int/publications/m/item/a-who-strategic-research-agenda-for-filovirus-research-and-monitoring-----(who-afirm)

-- Building research readiness for a future filovirus outbreak, Workshop February 20 - 22, 2024, Uganda https://www.who.int/news-room/events/detail/2024/02/20/default-calendar/building-research-readiness-for-a-future-filovirus-outbreak-workshop-february-20-22-2024-uganda

-- WHO Technical Advisory Group – candidate vaccine prioritization.  Summary of the evaluations and recommendations on the four Marburg vaccines.   https://www.who.int/publications/m/item/who-technical-advisory-group---candidate-vaccine-prioritization.--summary-of-the-evaluations-and-recommendations-on-the-four-marburg-vaccines

-- Marburg virus vaccine landscape  https://www.who.int/publications/m/item/marburg-virus-vaccine-landscape

-- Marburgvirus therapeutics landscape https://www.who.int/publications/m/item/marburg-virus-therapeutics-landscape

-- Considerations for border health and points of entry for filovirus disease outbreaks: https://www.who.int/publications/m/item/considerations-for-border-health-and-points-of-entry-for-filovirus-disease-outbreaks

Citable reference: World Health Organization (14 January 2024). Disease Outbreak News; Outbreak of suspected Marburg Virus Disease in the United Republic of Tanzania. Available at: https://www.who.int/emergencies/disease-outbreak-news/item/2025-DON552

Source: World Health Organization, https://www.who.int/emergencies/disease-outbreak-news/item/2025-DON552

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Tuesday, January 14, 2025

#Influenza A virus in dairy #cattle: #infection #biology and potential mammary #gland-targeted #vaccines

Abstract

Influenza, a major “One Health” threat, has gained heightened attention following recent reports of highly pathogenic avian influenza in dairy cattle and cow-to-human transmission in the USA. This review explores general aspects of influenza A virus (IAV) biology, its interactions with mammalian hosts, and discusses the key considerations for developing vaccines to prevent or curtail IAV infection in the bovine mammary gland and its spread through milk.

Source: npj Vaccines, https://www.nature.com/articles/s41541-025-01063-7

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