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Showing posts with the label avian influenza

Isolation and subtyping of avian #influenza A virus from wild #birds in #Khartoum, #Sudan

  Abstract Avian influenza (AI) is a significant disease affecting chickens and other avian species. Wild birds are thought to contribute to the virus transmission. The present study intends to explore the existence of AI type A virus in wild birds at the Six April Zoo, Khartoum State, Sudan . A total of 42 cloacal and tracheal swabs were collected from clinically healthy individuals belonging to five different wild bird species . The selected wild bird species were Common crane Grus grus, Sudan crowned crane Balearica pavonina, Helmeted guinea fowl Numida meleagris, Duck sp. Anatidae and Chestnut-billed sand grouse Pterocles exustus . Swabs were examined for AI virus antigen using the agar gel immunodiffusion (AGID) test, and all tested swabs produced positive results . The swab samples were inoculated into embryonated chicken eggs. The isolated virus was identified by AGID test and polymerase chain reaction . The virus was isolated from swabs collected from Grus grus, Balearica p...

#Poland - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

  By Andrey Gulivanov - Taiga bean goose, CC BY 2.0,  https://commons.wikimedia.org/w/index.php?curid=161227833 __ A wild Bean Goose in Łódzkie Region. Source:  Link:  https://wahis.woah.org/#/in-review/7127 ____

Immunological and virological #questions for #H5N1 #pandemic emergence

  Abstract Zoonotic spillover of influenza A viruses into humans has repeatedly triggered pandemics throughout history. Since their emergence in the 1990s, H5N1 influenza viruses have significantly expanded their geographical range and host species , raising global concern about the potential for sustained human-to-human transmission . In this review , we examine the virological characteristics of currently circulating H5N1 strains, key molecular barriers limiting their spread among humans, and critical areas of future research to mitigate the ongoing H5N1 panzootic and prevent future pandemics. Source:  Link:  https://academic.oup.com/immunohorizons/article/9/SI/vlaf062/8381786 ____

Mass #mortality at #penguin mega-colonies due to avian cholera confounds #H5N1 HPAIV #surveillance in #Antarctica

  Abstract In the austral summer 2023/2024, H5N1 high pathogenicity avian influenza virus (HPAIV) was reported for the first time in Antarctica . Concerns of HPAIV causing high mortality of seabirds and mammals prompted immediate efforts to track its spread and impact on endemic wildlife. In March 2024, we visited the Danger Islands archipelago , that hosts two mega-colonies of Adélie penguins , and observed an unusual mortality estimated in thousands of Adélie penguins and other species . Swabs and tissues were collected for molecular detection of infectious agents from 49 carcasses, and additional tissues for histology from a selection of 9 carcasses. We unexpectedly detected Pasteurella multocida DNA in 46 of 49 individuals, and diagnosed avian cholera , and not HPAI , as the cause of death of most of these animals. By metagenomics, we retrieved the genomic sequences of the Pasteurella multocida strain which caused the epizootic, and the phylogenetic analysis showed a close rela...

#Poland - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

  A mute swan in Mazowieckie Region. Source:  Link:  https://wahis.woah.org/#/in-review/7123 ____

Chinese #Taipei - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

Samples from Qieding District, Kaohsiung City and Annan District, Tainan City were sent to the National Laboratory, Veterinary Research Institute (VRI), for diagnosis. Highly pathogenic avian influenza H5N1 subtype were confirmed by VRI. The sampling spots were disinfected. Surrounding poultry farms within 3 km radius of the sampling spot are under intensified surveillance for 28 days. By Cp9asngf - Own work, CC BY-SA 3.0,  https://commons.wikimedia.org/w/index.php?curid=27358997 A dead black-faced spoonbill (Platalea minor) was found in Sicao, Annan District, Tainan City. The specimen was sent to National Reference Laboratory for testing. It was confirmed as Highly Pathogenic Avian Influenza (HPAI) on December 7. ___ By Photo by Laitche, CC BY-SA 4.0,  https://commons.wikimedia.org/w/index.php?curid=46904763 A dead Eurasian Wigeon (Anas penelope) was found in Qieding District, Kaohsiung City. The specimen was sent to National Reference Laboratory for testing. It was confirmed...

#Poland - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

A wild Greylag Goose in Podlaskie Region. Source:  Link:  https://wahis.woah.org/#/in-review/7096 ____

#Namibia - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

  By MPF - Own work, CC BY-SA 4.0,  https://commons.wikimedia.org/w/index.php?curid=102468449 Approximately 30 wild birds on an island near Lüderitz were observed exhibiting clinical signs consistent with highly pathogenic avian influenza (HPAI). Enhanced and continuous surveillance activities are ongoing to assess the extent of infection and monitor potential spread. Source:  Link:  https://wahis.woah.org/#/in-review/7120 ____

The #potential of #H5N1 viruses to adapt to #bovine cells varies throughout #evolution

  Abstract Avian influenza H5N1 clade 2.3.4.4b viruses caused a global panzootic and, unexpectedly, widespread outbreaks in dairy cattle , therefore representing a pandemic threat . To inform control strategies, it is critical to determine whether the potential to adapt to bovine cells is a general feature of H5N1 viruses , is specific to viruses of clade 2.3.4.4b, or narrowly restricted to some genotypes within this clade. Using a large panel of recombinant viruses representing >60 years of H5N1 history and other IAVs for comparison, we demonstrate replicative fitness in bovine cells is: (i) highly variable across 2.3.4.4b genotypes, (ii) limited in viruses predating the global expansion of this clade , (iii) determined by the internal gene cassette, and (iv) not restricted to udder epithelial cells. Mutations in the PB2 polymerase subunit emerge as key determinants of adaptation , although their phenotypic effects are context dependent. Bovine B3.13 and some avian genotypes ex...

#Influenza and Other Respiratory Viruses Research #References (by AMEDEO, Dec. 15 '25)

  Biochem Biophys Res Commun HU J, Li J, You W, Liu L, et al Disruption of the local vRNA structure at the end of HA encoding region interferes with the selective packaging of influenza A virus genome. Biochem Biophys Res Commun. 2025;795:153082. PubMed           Abstract available BANGARU MLY, Raghavendra NK Helix alpha1 of human ACE2 mimics dsDNA and Spike of SARS-CoV-2 binds DNA. Biochem Biophys Res Commun. 2025;793:153020. PubMed           Abstract available Cell WASDIN PT, Johnson NV, Janke AK, Held S, et al Generation of antigen-specific paired-chain antibodies using large language models. Cell. 2025;188:7206-7221. PubMed           Abstract available YAN L, Huang Y, Liu Y, Ge J, et al Structural basis for the concurrence of template recycling and RNA capping in SARS-CoV-2. Cell. 2025;188:7194-7205. PubMed           Abs...

#Human monoclonal #antibodies that target clade 2.3.4.4b #H5N1 hemagglutinin

  Abstract The highly pathogenic avian influenza H5N1 virus clade 2.3.4.4b has been spreading globally since 2022 , causing mortality and morbidity in domestic and wild birds, as well as in mammals , which underscores its potential to cause a pandemic . Here, we generate a panel of anti-hemagglutinin (HA) human monoclonal antibodies (mAbs) against the H5 protein of clade 2.3.4.4b. To develop human chimeric antibodies , H2L2 Harbor Mice®, which express human immunoglobulin germline genes, were immunized with H5 and N1 recombinant proteins from A/mallard/New York/22-008760-007- original/2022 H5N1 virus. Through hybridoma technology, sixteen fully human mAbs are generated, most of which show cross-reactivity against H5 proteins from different clade 2.3.4.4 virus variants . Fourteen out of the sixteen mAbs neutralize the virus in vitro . The mAbs with the strongest hemagglutination inhibition activity also demonstrate greater neutralizing capacity and show increased protective effects ...

Novel Highly Pathogenic Avian #Influenza #H5N1 Virus, #Argentina, 2025

  Abstract Genomic sequencing of reemerging highly pathogenic avian influenza A(H5N1) virus detected in Argentina in February 2025 revealed novel triple-reassortant viruses containing gene segments from Eurasian H5N1 and low pathogenicity viruses from South and North American lineages . Our findings highlight continued evolution and diversification of clade 2.3.4.4b H5N1 in the Americas. Source:  Link:  https://wwwnc.cdc.gov/eid/article/31/12/25-0783_article ____

#USA, #Wastewater Data for Avian #Influenza #H5 (#US CDC, Dec. 12 '25)

  {Excerpt} Time Period: November 30, 2025 - December 06, 2025 -- H5 Detection :  2 site(s) ( 0.5% ) -- No Detection :  390 site(s) ( 99.5% ) -- No samples in last week :  54 site(s) (...) Source:  Link:  https://www.cdc.gov/nwss/rv/wwd-h5.html ____

High pathogenicity avian #influenza virus #H5N1 (clade 2.3.4.4b) drives mass #mortality in Eurasian #crane (Grus grus) populations in #Germany, 2025

  Abstract In autumn 2025, an unprecedented mass mortality event was observed among the western migrating subpopulation of Eurasian cranes (Grus grus) in Germany . Systemic infection with highly pathogenic avian influenza virus H5N1 , clade 2.3.4.4b, genotype DI.2.1, was identified as the cause of acute death. The gregarious behavior of cranes at feeding and resting sites likely has contributed to the rapid and massive dissemination of viruses within the crane population. Competing Interest Statement The authors have declared no competing interest. Funder Information Declared European Union, 101084171 Source:  Link:  https://www.biorxiv.org/content/10.64898/2025.12.08.692485v1 ____

#Human #Infection with Avian #Influenza #H10N3 Virus, #China, 2024

  Abstract We describe the clinical symptoms and epidemiologic characteristics of a patient infected with avian influenza A(H10N3) virus in Guangxi Province , China , in December 2024. Whole-genome sequencing showed that the virus was highly homologous to a virus from Yunnan Province . H10 subtype viruses should be monitored for potential zoonotic or reassortant events. {From Emerging Infectious Diseases Journal, US CDC.} Sources:  Link:  https://pubmed.ncbi.nlm.nih.gov/41237415/ ____

#Kazakhstan - #Influenza A #H5 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification [FINAL]

{Greylag Goose} {Mallards} A Greylag Goose, two Mallards  in Aqmola Region. Source:  Link:  https://wahis.woah.org/#/in-review/7093 ____

#Estonia - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

  The outbreak affecting captive birds was in an establishment with 4 laying hens , 1 cock and 1 runner duck located in Harju county, Viimsi parish . The outbreak was confirmed on the 9th of December 2025 based on analysis performed tracheal and brain samples at the National Centre for Laboratory Research and Risk Assessment, and in accordance with the case definition. Measures were only applied in the outbreak establishment. Based on a risk assessment, no restricted zone was established around the affected establishment in accordance with Article 21(3)(g). The establishment concerned kept only 6 captive birds and they had no direct or indirect contact with poultry or other establishments keeping captive birds . In the establishment, all captive birds were already dead. No culling was necessary. Preliminary cleaning and disinfection was applied. Source:  Link:  https://wahis.woah.org/#/in-review/7092 ____

Foraging #ecology drives viral community structure in #NZ's aquatic #birds

  Abstract Wild migratory birds play a major role in the global spread of viruses, yet the diversity, host range and transmission patterns of viruses harboured by migratory species in Aotearoa/New Zealand remain largely unknown . This knowledge gap is critical given New Zealand's position along major migratory flyways spanning Oceania, Antarctica and east Asia , where understanding viral diversity is key to assessing the risk of viral introductions such as highly pathogenic avian influenza virus and viral dispersal across these regions. To address this, we conducted the first large-scale metatranscriptomic survey of wild birds from New Zealand and its subantarctic islands , collecting 1,348 samples from 31 host species spanning four avian orders . We identified 118 avian viruses from 17 families , including 107 novel species , greatly expanding our knowledge of avian viral diversity. Viral communities differed significantly by host order and foraging behaviour, with scavenger birds...

Distinctive viral #genome #signatures are linked to repeated #mammalian #spillovers of #H5N1 in North #America

  Abstract Highly pathogenic avian influenza H5N1 rarely infects mammals. In 2024-2025, however, genotypes B3.13 and D1.1 caused two independent spillovers into U.S. dairy cattle . By analysing 26,930 complete H5N1 genomes from global surveillance , we identified 73 major viral groups , most of which show continent-specific distribution in Europe, Asia, Africa , and North America . North American viruses exhibit higher genetic diversity in specific viral segments , including variants potentially associated with mammalian adaptation . Both dairy-cattle-associated B3.13 and D1.1 genotypes originate from the same geographic macro-area , suggesting a possible regional hotspot where avian-mammalian interfaces may facilitate viral adaptation. Our findings place the U.S. outbreaks in a global framework and indicate that North American H5N1 may be predisposed to cross-species transmission. Competing Interest Statement The authors have declared no competing interest. Funder Information Decl...

Evolutionary trajectories and #zoonotic #potential of a #PB2 #mutation triad (I147T, K339T, and A588T) in avian #influenza viruses

  Abstract Efficient replication of influenza A viruses (IAVs) requires balanced activities of hemagglutinin (HA), neuraminidase (NA), and the RNA polymerase complex, whose functions are strongly influenced by PB2 mutations . We previously revealed three distinct evolutionary pathways for PB2 mutations, with two pathways leading to the emergence of viral strains responsible for human seasonal infections and the 2009 pandemic , and a third pathway giving rise to H5Nx highly pathogenic avian influenza viruses (HPAIVs) defined by a triad of mutations (I147T, K339T, and A588T) that occasionally spill over to humans . Here, we investigated the zoonotic risk posed by this triad and elucidated its evolutionary relationship with HA, NA, and vaccination . Recombinant PR8 and clade 2.3.2.1c H5N1 viruses carrying the triad replicated efficiently in embryonated chicken eggs and had moderate replication efficiency in mammalian cells ; moreover, mice infected with these viral strains exhibited m...