Phylogenetic and Molecular Characterization of a Novel #Reassortant High-Pathogenicity Avian #Influenza #H7N6 Virus Detected in #NZ #Poultry
Abstract H7 high-pathogenicity avian influenza (HPAI) virus outbreaks can cause high rates of morbidity and mortality in poultry flocks , leading to devastating impacts on poultry industries. In December 2024 , an HPAI virus was detected on a poultry farm in New Zealand , being the first time a case of HPAI was reported in the country. Whole-genome sequencing, subtyping, phylogenetic, and mutation analyses were performed to characterize the virus. Results indicated a novel high-pathogenicity H7N6 avian influenza virus arose through a reassortment event between endemic low-pathogenicity H4N6 and H7 viruses, followed by two mutations at the H7 gene cleavage site . Mutation analysis suggests the novel H7N6 virus exhibits increased risk of host specificity shift , but further work is required to fully understand the functional impacts of the detected mutational events. In this instance, a timely biosecurity response was effective in eliminating the virus and preventing its transmissi...