ETIDIOH - NEW

  Abstract Human non-polio enteroviruses (NPEVs) cause a plethora of infections in humans, ranging from mild to severe neurological diseases including aseptic meningitis . NPEVs are the leading cause of aseptic meningitis in both children and adults worldwide . In Russia , reports of NPEV infections have surged, especially in the post-COVID era starting in 2022, with elevated infection rates into 2023 . A comprehensive examination of the whole genome is crucial for understanding the evolution of NPEV genes and for predicting potential outbreaks. This study focused on identifying the circulating NPEV strains in the Ural Federal District and Western Siberia , using Sanger sequencing and next-generation sequencing (NGS) methodologies. Biological samples were collected from (n = 225) patients diagnosed with aseptic meningitis. Bioinformatics analysis targeted the nucleotide sequences of the major capsid protein (partial VP1) gene fragment, and the assembly of whole NPEV genomes. A tota...

  Abstract Highly pathogenic avian influenza (HPAI) A(H5N1) clade 2.3.4.4b has recently emerged as a major threat to wildlife , agriculture, and public health due to its expanding host range and the increasing frequency of spillover into mammals . In July–August 2023, the mass death of over 3500 northern fur seals (Callorhinus ursinus) and at least one Steller sea lion (Eumetopias jubatus) was recorded on Tyuleniy Island in the Sea of Okhotsk, Russia. Two HPAI A( H5N1 ) viruses were isolated from fur seal carcasses and designated A/Northern_fur_seal/Russia_Tyuleniy/74/2023 and A/Northern_fur_seal/Russia_Tyuleniy/75/2023. Both viruses exhibited high pathogenicity in chickens (IVPI 2.7–3.0) and mice (MLD50 1.9–2.5 log10EID50/mL), with distinct differences in disease progression, histopathology, and organ tropism . Experimental infection of mice revealed that strain A/74/2023 induced more severe pulmonary and neurological lesions than A/75/2023. Whole-genome sequencing and phylogeneti...

  Abstract The global spread of highly pathogenic avian influenza A(H5N1) clade 2.3.4.4b viruses has recently extended to include diverse mammalian species , raising new concerns about pandemic risk . In 2023, this clade was first detected in Russian marine mammals during a mass mortality event among northern fur seals in the Far East . Genetic analyses revealed the causative viruses to belong to genotype A3 of European origin , which is known to have circulated in wild birds across the Far East since 2022. Notably, these isolates harbor the mammalian-adaptive substitutions PB2-K482R and NP-N319K—mutations previously linked to enhanced virulence in non-H5 avian influenza viruses , but whose impact on A(H5N1) clade 2.3.4.4b viruses remained to be characterized. The heightened virulence of A3 genotype viruses is confirmed by data obtained via a mouse model . However, despite these adaptive changes, ferret transmission models showed no evidence of airborne transmission of the fur seal...

Di dierat-stock - Crow-1, CC BY 3.0,  https://commons.wikimedia.org/w/index.php?curid=33155653 A wild Carrion Crow in Khabarovsk Region. Source: WOAH,  https://wahis.woah.org/#/in-review/6622 ____

Abstract Wild waterbirds are circulating important RNA viruses, such as avian coronaviruses, avian astroviruses, avian influenza viruses, and avian paramyxoviruses . Waterbird migration routes cover vast territories both within and between continents. The breeding grounds of many species are in the Arctic, but research into this region is rare. This study reports the first Newcastle disease virus (NDV) detection in Arctic Russia . As a result of a five-year study (from 2019 to 2023) of avian paramyxoviruses and avian influenza viruses in wild waterbirds of the Taimyr Peninsula , whole-genome sequences of NDV and H3N8 were obtained . The resulting influenza virus isolate was phylogenetically related to viruses that circulated between 2021 and 2023 in Eurasia, Siberia, and Asia. All NDV sequences were obtained from the Herring gull, and other gull sequences formed a separate gull-like clade in the sub-genotype I.1.2.1, Class II. This may indirectly indicate that different NDV variants ad...

  Ukraine’s Zaporizhzhya Nuclear Power Plant (ZNPP) has lost all off-site power for the ninth time during the military conflict and now relies on emergency diesel generators for the electricity it needs, underlining the extremely fragile nuclear safety situation at the site , IAEA Director General Rafael Mariano Grossi said today. The plant’s connection to its last remaining 750 kilovolt (kV) power line was cut at 17:37 local time today. While the cause was not immediately known, it coincided with air raid alarms in the region, Director General Grossi said, citing information from the Ukrainian nuclear regulator. It was the first time the ZNPP suffered a complete loss of off-site power since 2 December 2023. The IAEA team based at the site , Europe’s largest nuclear power plant (NPP), reported that 18 emergency diesel generators immediately started operating to generate the electricity the plant needs to be able to cool the reactors and the spent fuel pools . The plant has diesel f...

Abstract In this report, we document and analyze a case in which the Irkut virus (IRKV) (Mononegavirales: Rhabdoviridae) caused a fatal human case following a bat bite in June 2021. Unfortunately, the available data did not permit a detailed taxonomic classification of the carrier bat ( Chiroptera ). The event occurred in the southwestern part of the Sikhote-Alin mountain region (Russian Far East) covered by the Ussuri taiga forest . The symptoms of the illness began with the following: fever ; pronounced psychomotor and motor agitation ; tremor of the lower jaw and tongue ; aphasia; dyslexia; and dysphagia . These rapidly developed, leading to a severe and fatal encephalitis . The patient was not vaccinated for rabies and did not receive rabies immunoglobulin. Using brain sections prepared from the deceased, molecular diagnostics were performed: immunofluorescence (polyclonal anti-rabies immunoglobulin) indicating the presence of the lyssavirus antigen ; and RT-PCR indicating traces o...

Abstract Thousands of outbreaks of the highly pathogenic avian influenza A(H5N1) virus in birds and an increasing number of mammal infections are registered annually. In 2023, multiple avian influenza outbreaks were registered among wild birds, poultry and seals in Russia . The genetic characterization of seventy-seven avian viruses and three viruses from seals showed that they belonged to the 2.3.4.4b clade and represented four distinct reassortant genotypes . The majority of viruses represented genotype BB , which was widespread in Europe in 2023. Viruses from seals and four viruses from birds , isolated from outbreaks in the Far East region , belonged to the G1 (A3) genotype and had the amino acid substitution N319K in the NP protein , previously associated with an increased virulence for mammals . In addition, one virus of the G10 genotype and two viruses, representing a previously undescribed genotype (designated as Ru-23-G4) were identified. The viruses analyzed showed normal inh...

Abstract Yakutia, the largest breeding ground for wild migratory birds in Northeastern Siberia , plays a big role in the global ecology of avian influenza viruses (AIVs). In this study, we present the results of virological surveillance conducted between 2018 and 2023, analyzing 1970 cloacal swab samples collected from 56 bird species . We identified 74 AIVs of H3N6, H3N8, H4N6, H5N3, H7N7, H10N3, and H11N9 subtypes in Anseriformes order. Phylogenetic analysis showed that the isolates belong to the Eurasian lineage and have genetic similarities with strains from East Asia, Europe, and North America. Cluster analysis has demonstrated the circulation of stable AIV genotypes for several years. We assume that Yakutia is an important territory for viral exchange on the migratory routes of migrating birds. In addition, several amino acid substitutions have been found to be associated with increased virulence and adaptation to mammalian hosts , highlighting the potential risk of interspecific...

 A wild Carrion Crow in Khabarovsk Region. Source:  https://wahis.woah.org/#/in-review/6304 ____

{Automatic Translation} Since 2020, the world has seen an increase in the number of outbreaks of avian influenza caused by the highly pathogenic avian influenza A (H5N1) virus and an expansion of the geography of circulation of this virus. In 2024, more than 1.2 thousand outbreaks of influenza A (H5N1) among wild birds and about 2 thousand outbreaks among poultry were registered in the world. The infection affected 68 countries in Asia, Europe, Africa, North and South America, and also reached Antarctica. In addition, in 2024, a large number of cases of detection of the influenza A (H5N1) virus among wild and domestic mammals were recorded, including with subsequent infection of people. These include outbreaks among cattle on US dairy farms, which by the end of the year affected more than 900 dairy farms in 16 states. The avian influenza A (H5N1) virus, isolated from cows, also caused illness in 40 people - farm workers. At the same time, the influenza A(H5N1) viruses detected in cows ...

Abstract H4Nx avian influenza viruses (AIVs) have been isolated from wild birds and poultry and can also cross the species barrier to infect mammals ( pigs and muskrats ). The widespread presence of these viruses in wild birds and poultry and their ability to be transmitted interspecies make them an undeniable hazard to the poultry farming industry. In the present study, we collected fecal and swab samples from wild birds and poultry in Guangdong Province from January 2019 to March 2024, and various subtypes of AIVs were isolated, including 19 strains of H4 subtype AIVs . Further analysis was conducted on the internal genes of the 19 strains . These strains clustered together with high homology to highly pathogenic avian influenza virus (HPAIV), suggesting that H4Nx AIV may be reassorted from HPAIV . Two H4N8 strains are phylogenetically related to the porcine H4N8 AIV. Molecular characterization revealed that all viruses in this study were less pathogenic but had potential mammalian-a...