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#Sweden - #Influenza A #H5N1 viruses of high pathogenicity (Inf. with) (non-poultry including wild birds) (2017-) - Immediate notification

A whopper swan was found dead . It was sent to the Swedish Veterinary Agency (formerly National Veterinary Institute) for laboratory analysis as part of the national surveillance program for avian influenza. Source: WOAH,  https://wahis.woah.org/#/in-review/6299 ____

A #WHO global #framework to guide #investigations into origins of potentially #epidemic and #pandemic #pathogens

{Summary} In outbreak situations involving a novel pathogen timely and coordinated response is crucial. The WHO Scientific Advisory Group for the Origins of Novel Pathogens recently released a global framework to guide future scientific investigations into the origin of emerging pathogens. Source: Nature Communications,  https://www.nature.com/articles/s41467-025-57218-6 ____

Identification of Aminoacid #Residues Responsible for Differential #Replication & #Pathogenicity of Avian #Influenza Virus #H5N1 Isolated from #Human & #Cattle in #Texas

Abstract Highly pathogenic avian influenza viruses (HPAIV) pose a serious public health concern . In March 2024, a first-time outbreak of HPAIV H5N1 in dairy cattle herds was reported in the United States (US). Since then, the virus has continued to spread in cattle herds and spilt over into humans . We recently showed that the first human isolate reported in the US in Texas (HPhTX) from a dairy worker in an affected cattle farm has enhanced replication kinetics and pathogenicity in mice compared to a closely related bovine isolate (HPbTX). However, the molecular determinants of differential pathogenicity have not yet been identified. Herein, we show that HPhTX has enhanced polymerase activity , compared with HPbTX, in human cells and that the polymerase basic 2 (PB2) protein is the main factor responsible for this difference. Through single and combined site-directed mutagenesis and swapping the three amino acids different between HPhTX and HPbTX, we found that PB2 mutation E627K is t...

#Portimine A #toxin causes #skin #inflammation through ZAKα-dependent NLRP1 inflammasome activation

Abstract In 2020–2021, a “mysterious illness” struck Senegalese fishermen , causing severe acute dermatitis in over one thousand individuals following exposure through drift-net fishing activity . Here, by performing deep analysis of the environmental samples we reveal the presence of the marine dinoflagellate Vulcanodinium rugosum and its associated cyclic imine toxins . Specifically, we show that the toxin PortimineA, strongly enriched in environmental samples, impedes ribosome function in human keratinocytes , which subsequently activates the stress kinases ZAKα and P38 and promotes the nucleation of the human NLRP1 inflammasome, leading to the release of IL-1β/IL-18 pro-inflammatory cytokines and cell death . Furthermore, cell-based models highlight that naturally occurring mutations in the P38-targeted sites of human NLRP1 are unable to respond to PortimineA exposure. Finally, the development and use of human organotypic skins and zebrafish models of PortimineA exposure demonstrat...

#Coronavirus Disease Research #References (by AMEDEO, March 1 '25)

  Am J Respir Crit Care Med KERWIN E, Yang T, Su N, Guo J, et al Rademikibart Treatment for Moderate-to-Severe, Uncontrolled Asthma: A Phase 2B Randomized Trial. Am J Respir Crit Care Med. 2025 Feb 25. doi: 10.1164/rccm.202409-1708. PubMed           Abstract available Antiviral Res BRUN J, Arman BY, Hill ML, Kiappes JL, et al Assessment of repurposed compounds against coronaviruses highlights the antiviral broad-spectrum activity of host-targeting iminosugars and confirms the activity of potent directly acting antivirals. Antiviral Res. 2025 Feb 23:106123. doi: 10.1016/j.antiviral.2025.106123. PubMed           Abstract available BMJ MACINTYRE CR, Chughtai AA, Kunasekaran M, Tawfiq E, et al The role of masks and respirators in preventing respiratory infections in healthcare and community settings. BMJ. 2025;388:e078573. PubMed           Abstract avai...

#Influenza and Other Respiratory Viruses Research #References (by AMEDEO, March 1 '25)

BMC Pediatr MEHDIZADEGAN N, Omidbakhsh S, Shorafa E, Hosseini H, et al Speckle-tracking and conventional echocardiography in MIS-C: tracking cardiac involvement and recovery. BMC Pediatr. 2025;25:137. PubMed           Abstract available BMJ MACINTYRE CR, Chughtai AA, Kunasekaran M, Tawfiq E, et al The role of masks and respirators in preventing respiratory infections in healthcare and community settings. BMJ. 2025;388:e078573. PubMed           Abstract available Epidemiol Infect LIN W, Kung KH, Chan CL, Chuang SK, et al Characteristics and risk factors associated with COVID-19 reinfection in Hong Kong: a retrospective cohort study. Epidemiol Infect. 2025;153:e30. PubMed           Abstract available HOEVE CE, Neppelenbroek N, Vos ERA, Huiberts AJ, et al Using SARS-CoV-2 nucleoprotein antibodies to detect (re)infection. Epidemiol Infect. 2025;153:e38. PubM...

Molecular #patterns of #matrix protein 1 (M1): A strong predictor of adaptive #evolution in #H9N2 avian #influenza viruses

Significance The dominance of the H9N2 subtype of avian influenza virus (AIV) within the influenza A virus family has raised questions regarding the factors influencing its epidemiological dominance . This study concentrates on the role of five major evolutionary patterns of the matrix protein M1 in the replication and transmission of H9N2 AIVs. The findings indicate a strong correlation between the epidemiological dominance of H9N2 AIVs and the specific M1 patterns , particularly M1P5. It highlights the significance of genetic patterns in M1 for understanding the adaptive differences and turnover of epidemiological dominant H9N2 AIVs. Abstract The H9N2 subtype of avian influenza virus (AIV) emerges as a significant member of the influenza A virus family. However, the varying degrees of epidemiological dominance among different lineages or clades of H9N2 AIVs have not been fully clarified. The matrix protein M1 , a key structural component of the virion , plays a crucial role in mainta...

Dynamics of natural #selection preceding #human viral #epidemics and #pandemics.

Abstract Using a phylogenetic framework to characterize natural selection , we investigate the hypothesis that zoonotic viruses require adaptation prior to zoonosis to sustain human-to-human transmission . Examining the zoonotic emergence of Ebola virus, Marburg virus, influenza A virus, SARS-CoV, and SARS-CoV-2 , we find no evidence of a change in the intensity of natural selection immediately prior to a host switch , compared with typical selection within reservoir hosts . We conclude that extensive pre-zoonotic adaptation is not necessary for human-to-human transmission of zoonotic viruses. In contrast, the reemergence of H1N1 influenza A virus in 1977 showed a change in selection, consistent with the hypothesis of passage in a laboratory setting prior to its reintroduction into the human population, purportedly during a vaccine trial. Holistic phylogenetic analysis of selection regimes can be used to detect evolutionary signals of host switching or laboratory passage, providing ins...

Phylogenetic #discordance cannot identify #genomic #reassortment events: a case study with the avian #influenza virus #H5Nx

Abstract Recombination plays a central role in the evolution of the RNA virus genome , as it allows the exchange of genetic material between different viral lineages . Reassortment is a form of recombination specific to viruses with segmented genomes that involves the exchange of entire segments between lineages. This process has played a significant role in the adaptation and spread of influenza viruses, where novel combinations of genomic segments are produced from divergent lineages (i.e., antigenic shift). In this study, we investigated reassortment events in a representative sample of n = 11, 765 complete genomes of H5Nx influenza A viruses from avian hosts . Using tanglegrams and subtree-prune-regraft (SPR) methods to quantify discordance between segment trees, we found evidence of widespread reassortment among these genomes that is consistent with previous studies. However, we obtained the comparable numbers of reassortment events when applying the same methods to sequence data ...

Elucidating the Characteristics and #Clonal Evolutionary #Trajectory of #Influenza #Neuraminidase Broadly Reactive B Cell

Abstract Influenza virus neuraminidase (NA) is receiving increasing attention as a target for universal flu vaccines . Several broad NA inhibition monoclonal antibodies (BImAbs) targeting the highly conserved enzymatic pocket have been previously described. However, the molecular characteristics, clonal evolutionary trajectory, and B cell sources of BImAbs remain poorly understood. Here, using NA-mutant probes, we comprehensively profiled the immune signatures of NA-specific memory B cells (MBCs) from a healthy individual with NA cross-inhibition activity . From the NA-specific MBC repertoires, we identified a series of NA BImAbs with molecular features characterized by long HCDR3 regions with an xxxDRxxx motif, which exhibited broad inhibition against diverse influenza NAs. Clonal lineage tracing revealed that these BImAbs followed a clonal evolutionary trajectory encompassing classical MBC (cMBC) and atypical MBC (aMBC). Both cMBC- and aMBC-derived NA BImAbs displayed similar inhibit...

#USA, #NJ: #H5N1 Highly Pathogenic Avian #Influenza Confirmed in New Jersey Cats {DoH}

TRENTON, NJ - The first feline case of H5 Highly Pathogenic Avian Influenza (HPAI or “bird flu”) in New Jersey has been confirmed in a feral cat from Hunterdon County .  The case was confirmed by the United States Department of Agriculture (USDA) National Veterinary Services Laboratory, and follows previous national reports of confirmed feline cases in other states.   The cat developed severe disease, including neurologic signs , and was humanely euthanized.  Other cats on the same property were also reported ill , and one additional indoor-outdoor cat was subsequently confirmed positive for H5 HPAI. Other tests are still pending, and the investigation is ongoing. The overall public health risk remains low at this time. While H5 HPAI has been detected in humans in the U.S. – primarily in individuals with close contact with infected poultry or dairy cattle – there have been no human cases reported in New Jersey, and none of the cases across the country are known to h...

#Sweden - High pathogenicity avian #influenza #H5N1 viruses (#poultry) (Inf. with) - Immediate notification

This is a farm with pheasants for game restocking . The birds are being euthanized 27 February  A protection zone (3km) and a surveillance zone (10 km) have been put in place around the infected farm and all other restrictions and necessary measures according to Regulation (EU) 2016/429 and (EU) 2020/687. Source: WOAH,  https://wahis.woah.org/#/in-review/6297 ____

#Recommendations announced for #influenza #vaccine #composition for the 2025-2026 northern hemisphere influenza season

The World Health Organization (WHO) today announced the recommendations for the viral composition of influenza vaccines for the 2025-2026 influenza season in the northern hemisphere.  The announcement was made at an information session at the end of a 4-day meeting on the Composition of Influenza Virus Vaccines, a meeting that is held twice annually.  WHO organizes these consultations with an advisory group of experts gathered from WHO Collaborating Centres and WHO Essential Regulatory Laboratories to analyse influenza virus surveillance data generated by the WHO Global Influenza Surveillance and Response System (GISRS).  The recommendations issued are used by the national vaccine regulatory agencies and pharmaceutical companies to develop, produce, and license influenza vaccines for the following influenza season.  The periodic update of viruses contained in influenza vaccines is necessary for the vaccines to be effective due to the constant evolving nature of influ...

#USA, Monitoring for Avian #Influenza A(#H5) Virus In #Wastewater {Feb. 28 '25}

  {Excerpt} Time Period: February 16 - February 22, 2025 -- H5 Detection :  10 sites ( 2.6% ) -- No Detection :  379 sites ( 97.4% ) -- No samples in last week :  75 sites (...) Source: US Centers for Disease Control and Prevention,  https://www.cdc.gov/bird-flu/h5-monitoring/index.html ____

A replicating #recombinant #VSV #model for dairy #cattle #H5N1 #influenza virus glycoprotein #evolution

Abstract A panzootic of highly pathogenic avian influenza (HPAI) H5N1 viruses from clade 2.3.4.4b has triggered a multistate outbreak in United States dairy cattle and an unknown number of human infections. HPAI viruses are handled in specialized biocontainment facilities. Ethical considerations limit certain experimental evolution experiments aimed at assessing viral resistance to potential therapeutics. We have developed a replicating recombinant vesicular stomatitis virus (rVSV) where we replaced its glycoprotein with the hemagglutinin (HA) and neuraminidase (NA) genes of a 2.3.4.4b H5N1 virus (rVSV-H5N1dc2024), which is free of these constraints. This virus grows to high titers and encodes a fluorescent reporter to track infection. We demonstrate the utility of rVSV-H5N1dc2024 in neutralization experiments, evaluating antibody escape and characterization of resistance mutations to NA inhibitors. rVSV-H5N1dc2024 or similar viruses may accelerate efforts to develop and evaluate inter...

Novel #human #coronavirus in an #infant #patient with #pneumonia, Republic of #Korea

ABSTRACT Coronaviruses (CoVs) pose a significant threat to public health , causing a wide spectrum of clinical manifestations and outcomes. Beyond precipitating global outbreaks, Human CoVs (HCoVs) are frequently found among patients with respiratory infections. To date, limited attention has been directed towards alphacoronaviruses due to their low prevalence and fatality rates . Nasal swab and serum samples were collected from a paediatric patient , and an epidemiological survey was conducted. Retrospective surveillance investigated the molecular prevalence of CoV in 880 rodents collected in the Republic of Korea (ROK) from 2018 to 2022. Next-generation sequencing (NGS) and phylogenetic analyses characterized the novel HCoV and closely related CoVs harboured by Apodemus spp . On 15 December 2022, a 103-day-old infant was admitted with fever, cough, sputum production, and rhinorrhea , diagnosed with human parainfluenza virus 1 (HPIV-1) and rhinovirus co-infection . Elevated AST/ALT le...

#DRC deepens #investigation on #cluster of #illness and #community #deaths in #Equateur province

Kinshasa – Health authorities in the Democratic Republic of the Congo and experts from World Health Organization (WHO) are carrying out further investigations to determine the cause of another cluster of illness and community deaths in Equateur province .  In recent months, disease surveillance has identified increases in illness and deaths three times in different areas of the country , and triggered follow-up investigations to confirm the cause and provide needed support.   Since the beginning of 2025 , a series of illnesses and community deaths have affected Equateur province . The most recent cluster occurred in the Basankusu health zone , where last week 141 additional people fell ill , with no deaths reported. In the same health zone, 158 cases and 58 deaths were reported in the same health zone earlier in February. In January, Bolamba health zone reported 12 people who fell ill including 8 deaths.  Increased disease surveillance has identified in total of 1096...

Avian #Influenza A(#H5) Subtype in #Wastewater — #Oregon, September 15, 2021–July 11, 2024 {MMWR}

Summary -- What is already known about this topic? -  Highly pathogenic avian influenza A(H5N1) outbreaks have emerged in U.S. cattle and poultry . Wastewater surveillance detects influenza A(H5) subtype but does not currently distinguish between human and animal sources. -- What is added by this report? -  During September 15, 2021–July 11, 2024 , retrospective analysis of wastewater surveillance data revealed 21 avian influenza A(H5) subtype detections across 12 Oregon communities . No association was found between detections in a community’s wastewater and history of a poultry outbreak or presence of dairy processing facilities or dairy farms within the sewershed. Avian influenza A(H5) was detected most frequently in two communities with important wild bird habitats . -- What are the implications for public health practice? -  Wastewater surveillance was an early indicator of avian influenza emergence in Oregon. Nonhuman and noncattle animal inputs , including wild bir...

#Pandemic #risk stemming from the #bovine #H5N1 #outbreak: an account of the #knowns and #unknowns

ABSTRACT H5N1 subtype influenza A viruses represent a long-standing pandemic concern . Owing to their global occurrence in poultry, humans are routinely exposed to these viruses, and hundreds of human cases have been documented worldwide since 2003. The relevant viral lineages are not static, however, and have recently undergone a massive expansion of host range and geographic distribution . Within this expansion, the introduction of H5N1 viruses into dairy cattle in the United States has spawned a novel animal-human interface . In response, public health agencies have sought to evaluate the risk of an H5N1 pandemic stemming from the bovine outbreak. These assessments draw on evidence from the field and the laboratory to score a series of recognized risk factors . As such, their utility hinges on fundamental understanding of the processes that drive pandemic emergence and the availability of relevant data. Advancing this understanding and gathering data prior to and during an outbreak ...