ETIDIOH - NEW

  ABSTRACT Swine acute diarrhea syndrome coronavirus (SADS-CoV) is a bat-originated virus causing severe diseases in piglets . Since the 2016 outbreak , diverse SADS-related CoVs (SADSr-CoVs) have been detected in Rhinolophus bats in China and Southeast Asia , but their potential interspecies infection and pathogenicity remain unknown. Herein, we sequenced the spike (S) genes of bat SADSr-CoVs and classified them into four genotypes . We constructed an infectious SADS-CoV cDNA clone (rSADS-CoV) and nine recombinant viruses by replacing the SADS-CoV S gene with that of bat SADSr-CoVs. Recombinant SADSr-CoVs could replicate efficiently in respiratory and intestinal cell lines and human- and swine-derived organoids and caused varying tissue damage and mortality in suckling mice. These viruses can be classified into at least five serotypes based on cross-neutralization assays . Our findings highlight the potential risk of interspecies infection and provide important information for fut...

  Abstract SARS-CoV-2 Spike - the sole neutralization target, is highly resilient to the immune pressure driving genetic evolution . While potency and breadth of neutralization are widely studied, the incomplete neutralization - the mechanism of resistance without needing genetic change - remains unexplored . Several monoclonal antibodies , although potent, showed incomplete neutralization of genetically homogeneous pseudovirus suggesting the existence of distinct spike conformations . The residual infectivity at high antibody concentration indicates a viral fraction with intrinsic resistance to the antibody. Although the published studies on spike glycosylation, structure, and conformations provide evidence of spike heterogeneity the precise mechanism for the incomplete neutralization has not been established. In this study, we devise a method to separate the un-neutralized virion population , called as persistent fraction of infectivity (PF), and characterize the viral spike prot...

  ABSTRACT With the SARS-CoV-2 Omicron XBB.1.9 subvariants circulating worldwide, two XBB.1.9 variants, EG.5.1 and HK.3 , spread rapidly and became dominant in mid-2023. However, the spike features, pathogenicity, and transmissibility of HK.3 are largely unknown. Here, we performed multiscale investigations to reveal the virological features of XBB.1.9 subvariants , including the newly emerging HK.3 . HK.3 revealed high replication efficiency and enhanced TMPRSS2 utilization in vitro. The HK.3 spike exhibited enhanced processing, although its infectivity, fusogenicity, and human ACE2 (hACE2) binding affinity were comparable to those of the EG.5 and XBB.1 spikes. All XBB.1.9.1, EG.5.1, and HK.3 strains demonstrated efficient transmission in hamsters , although XBB.1.9.1 exhibited stronger fitness in the upper airways . XBB.1.9.1, EG.5.1, and HK.3 exhibited greater pathogenicity than BA.2 in H11-K18-hACE2 hamsters. Our studies provide insights into the newly emerging pathogens EG.5.1...

  Significance Annual influenza epidemics in the United States cause hundreds of thousands of hospitalizations . Quantifying vaccine impact is vital, yet many analyses overlook vaccines’ dual benefits : directly protecting recipients and indirectly protecting their contacts . Using a mathematical model that accounts for both effects, we estimate that vaccination prevented about 70,000 hospitalizations during the 2022–2023 season , with another 19,000 potentially avoidable if coverage met the 70% national target. Despite uncertainty in vaccine effectiveness against infection, our findings suggest that vaccinating younger adults offers substantial indirect protection for older adults. Tailoring annual vaccination campaigns by age group and state could further strengthen their public health impact. Abstract During the COVID-19 pandemic early years, infection prevention measures suppressed transmission of seasonal influenza and other respiratory viruses . The early onset and moderate s...